|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Kaladp0099s0085.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
Family |
AP2 |
Protein Properties |
Length: 478aa MW: 52184.1 Da PI: 9.5421 |
Description |
AP2 family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Kaladp0099s0085.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 53.8 | 5e-17 | 143 | 192 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s y+GV++++++grW+++I+d + k+++lg f+ta Aa+a+++a+ k++g
Kaladp0099s0085.1.p 143 SPYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 192
68*******************......55************************997 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MFDLNIHYSH HHQSPHPSST DSAATSSSSV IVNSTSAGDE DSASINNHTS APPSTLFFDI 60 LNRDHENPVP VAGAGLVART LFPSAVESSS SPAVVPQWLN LSFADSASSH SELCSLQQPN 120 HHNLQQLKPV GKKSRRGPRS RSSPYRGVTF YRRTGRWESH IWDCGKQVYL GGFDTAHAAA 180 RAYDRAAIKF RGVDADINFD LKDYDNDMKQ MAELSKEEFV HVLRRQSTGF ARSSSKYKGV 240 TLHKYGRPDH AGLGQALAQS FYPVVFDREA AFARYNEGEA VTNTEANTYP RGYLTLNPIN 300 KGSDGTLDLS LGITPTSNNS CPTGTNITAI PGLPAYARHG RDRDMFNASA VRVLCGQPSS 360 HGFTNPSPTV WQFQQHPSNP AHMPQIKTAT MERRMSITNT PQRFPDWAVR VPIGRGGSIT 420 APMQLLSSAA SSGFPTGVVP TAPTRIASAI PLSKSPSNND VVYYNYRTIQ MNSFPYR*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Probable transcription factor (By similarity). Involved in spikelet transition. Together with SNB, controls synergistically inflorescence architecture and floral meristem establishment via the regulation of spatio-temporal expression of B- and E-function floral organ identity genes in the lodicules and of spikelet meristem genes. Prevents lemma and palea elongation as well as grain growth (By similarity). {ECO:0000250|UniProtKB:P47927, ECO:0000250|UniProtKB:Q84TB5}. |