PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0166.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family EIL
Protein Properties Length: 550aa    MW: 62544.2 Da    PI: 5.9693
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0166.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34655.4e-142434053353
                          XXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   3 lkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLr 92 
                          l+krmw+d+m++krl+er+k+    ke + g+kk+++s+eq+rrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipe+gkpv+gasd+Lr
  Kaladp0093s0166.1.p  43 LEKRMWRDKMRIKRLRERQKN----KEGDDGSKKQQQSEEQTRRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPENGKPVTGASDNLR 128
                          89******************8....66667899********************************************************* PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS
                 EIN3  93 aWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182
                          +WWk+ v+fdrngpaai ky ++n i++ + s  +    + ++l+elqDTtlgSLLsalmqhcdppqrrfple+gv+pPWWPtG+e+ww 
  Kaladp0093s0166.1.p 129 EWWKDRVRFDRNGPAAILKYMKDNSIPNPNGSH-MLVGPTTSTLQELQDTTLGSLLSALMQHCDPPQRRFPLERGVAPPWWPTGTEDWWC 217
                          **************************9977777.5599999************************************************* PP

                          HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX..XXXXX CS
                 EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss..slrkq 270
                          +lg++k qg+ppykkphdlkk wkv+vLtavikh++p++++ir+ +rqsk+lqdkm+ake+ ++++v+nqee++++++++ s    +++ 
  Kaladp0093s0166.1.p 218 QLGFPKTQGPPPYKKPHDLKKLWKVGVLTAVIKHIAPNFTKIRKFVRQSKSLQDKMTAKETSTWFAVINQEEAIARELYPPSViaCFNSY 307
                          *********************************************************************************876444445 PP

                          XXXXXXXXXXXXXXX.....XXXXXX.XXXXXXXXXX............XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXX CS
                 EIN3 271 spkvtlsceqkedve.....gkkeskikhvqavktta............gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelif 343
                          +p    ++  ++dv       ++ ++ +h++  + t+            +f++ +krk+  +e     s+  ++ c+s q+++ + +l+f
  Kaladp0093s0166.1.p 308 EPFESEDDLGEYDVPlaglfDDEGKNLSHSNISNLTTdtnysthieapmNFNFLSKRKA-AGEVDGSASR-RVYICDSPQCPYGDIRLGF 395
                          554445555688888999986666666777776666678999***************94.4444444444.47***************** PP

                          XXXXXXXXXX CS
                 EIN3 344 adknsisqne 353
                          +d+ s+++++
  Kaladp0093s0166.1.p 396 QDRASRDSHQ 405
                          ********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.8E-12442289No hitNo description
Gene3DG3DSA:1.10.3180.101.9E-70165297IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167686.8E-60169292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MGYDELDFLS GPHAEETMPT LQNESEAILY EDSSDEDIDV DALEKRMWRD KMRIKRLRER  60
QKNKEGDDGS KKQQQSEEQT RRKKMSRAQD GILKYMLKMM EVCNAQGFVY GIIPENGKPV  120
TGASDNLREW WKDRVRFDRN GPAAILKYMK DNSIPNPNGS HMLVGPTTST LQELQDTTLG  180
SLLSALMQHC DPPQRRFPLE RGVAPPWWPT GTEDWWCQLG FPKTQGPPPY KKPHDLKKLW  240
KVGVLTAVIK HIAPNFTKIR KFVRQSKSLQ DKMTAKETST WFAVINQEEA IARELYPPSV  300
IACFNSYEPF ESEDDLGEYD VPLAGLFDDE GKNLSHSNIS NLTTDTNYST HIEAPMNFNF  360
LSKRKAAGEV DGSASRRVYI CDSPQCPYGD IRLGFQDRAS RDSHQLACSF RNCSSSFQNI  420
NYQLKPLVFN PSYLQPASVD NGVVDIRQQV IGSVMSFYDN YVQRDRGQSQ KNSLNHQNLV  480
QAPNMSLDNQ MLIQDSSQFG HPHLQFESLP DGNNLIMMYS NTQFDPASPD IHGGTLDLIS  540
KQDPTTWFQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-731672992134Protein ETHYLENE INSENSITIVE 3
4zds_B2e-731672992134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012476376.10.0PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform X2
RefseqXP_016754802.10.0PREDICTED: protein ETHYLENE INSENSITIVE 3-like isoform X2
SwissprotQ9SLH01e-175EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLA0A1U8PUG80.0A0A1U8PUG8_GOSHI; protein ETHYLENE INSENSITIVE 3-like isoform X2
STRINGGorai.004G227800.10.0(Gossypium raimondii)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-177ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Kim HG, et al.
    GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
    Plant Physiol., 2013. 163(4): p. 1776-91
    [PMID:24170202]
  3. Zhang GB,Yi HY,Gong JM
    The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
    Plant Cell, 2014. 26(10): p. 3984-98
    [PMID:25326291]
  4. Wang J, et al.
    Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
    J Integr Plant Biol, 2015. 57(8): p. 708-21
    [PMID:25494721]
  5. Qing D, et al.
    Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
    Mol Plant, 2016. 9(1): p. 158-174
    [PMID:26476206]
  6. Poulios S,Vlachonasios KE
    Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
    J. Exp. Bot., 2016. 67(3): p. 905-18
    [PMID:26596766]
  7. Shen X,Li Y,Pan Y,Zhong S
    Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
    Front Plant Sci, 2016. 7: p. 1571
    [PMID:27822221]
  8. Abozeid A, et al.
    Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 253
    [PMID:28286514]
  9. Feng Y, et al.
    Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
    [PMID:29233944]
  10. Harkey AF, et al.
    Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
    Plant Physiol., 2018. 176(3): p. 2095-2118
    [PMID:29259106]