PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0093s0164.2.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family EIL
Protein Properties Length: 550aa    MW: 62159.7 Da    PI: 5.701
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0093s0164.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN34723.9e-144414111353
                          XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                 EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 
                          +el++rmw+d+m++krl+er+k+    ke + g+kk+++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipe+gkpv+gasd+
  Kaladp0093s0164.2.p  41 DELERRMWRDKMRIKRLRERQKS----KEGDDGSKKQQQSEEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPENGKPVTGASDN 126
                          79*******************98....66667899******************************************************* PP

                          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
                 EIN3  91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                          Lr+WWk+ v+fdrngpaai ky ++n i++ + s  +    + ++l+elqDTtlgSLLsalmqhcdppqrrfple+gv+pPWWPtG+e+w
  Kaladp0093s0164.2.p 127 LREWWKDRVRFDRNGPAAILKYMKDNSIPNPNGSH-MLVGPTTSTLQELQDTTLGSLLSALMQHCDPPQRRFPLERGVAPPWWPTGTEDW 215
                          ****************************9977777.5599999*********************************************** PP

                          HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXX CS
                 EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrk 269
                          w +lg++k qg+ppykkphdlkk wkv+vLtavikh++p++++ir+l+rqsk+lqdkm+ake+ ++l+v+nqee++++++++ s   + +
  Kaladp0093s0164.2.p 216 WCQLGFPKTQGPPPYKKPHDLKKLWKVGVLTAVIKHIAPNFTKIRKLVRQSKCLQDKMTAKETSTWLAVINQEEAIARELYPPSViACFN 305
                          ***********************************************************************************8854444 PP

                          XXXXXXXXXX.XXXXXX.....XXXXXX.XXXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXX......XXXXXX CS
                 EIN3 270 qspkvtlsce.qkedve.....gkkeskikhvqavktta..................gfpvvrkrkkkpsesakvsskevsrtcqssqfr 335
                          + + +  +++  ++dv       ++ ++ +h++  + t+                  ++++ +krk+ ++ + +v  +  ++ c+s q++
  Kaladp0093s0164.2.p 306 SYETFESEDDlGEYDVPlaglfDDQGKNLSHSNISNLTTdnttvfgsnygtqieaptNIDFSSKRKATSEVDGSVGRS--VYICDSPQCP 393
                          45555555442466777999984444444444444444445666**********************888888888766..8********* PP

                          X.XXXXXXXXXXXXXXXX CS
                 EIN3 336 gsetelifadknsisqne 353
                          + + +l+f+d+ s+++++
  Kaladp0093s0164.2.p 394 YGDIRLGFQDRASRDNHQ 411
                          ****************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048733.9E-12641289No hitNo description
Gene3DG3DSA:1.10.3180.106.1E-72165297IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.07E-60169292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MGYDELDFLS GSHVEKILPA PQNESEVVLY EDSSDDDIDV DELERRMWRD KMRIKRLRER  60
QKSKEGDDGS KKQQQSEEQA RRKKMSRAQD GILKYMLKMM EVCNAQGFVY GIIPENGKPV  120
TGASDNLREW WKDRVRFDRN GPAAILKYMK DNSIPNPNGS HMLVGPTTST LQELQDTTLG  180
SLLSALMQHC DPPQRRFPLE RGVAPPWWPT GTEDWWCQLG FPKTQGPPPY KKPHDLKKLW  240
KVGVLTAVIK HIAPNFTKIR KLVRQSKCLQ DKMTAKETST WLAVINQEEA IARELYPPSV  300
IACFNSYETF ESEDDLGEYD VPLAGLFDDQ GKNLSHSNIS NLTTDNTTVF GSNYGTQIEA  360
PTNIDFSSKR KATSEVDGSV GRSVYICDSP QCPYGDIRLG FQDRASRDNH QLTCSFRNSS  420
SSLKNVNYQL KPLVFNPSYI QPASVDNEVV DSRQQVIGSM MSFYDNYAQR DSGQPQRMSL  480
DQNQVQAPHL SFNNQMLIQD SSLFGNPHLP FESLPDGNNV SMIYGGAQFD IHGGTLDLIS  540
KQDPATWFQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A5e-761672992134Protein ETHYLENE INSENSITIVE 3
4zds_B5e-761672992134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003545483.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ9SLH00.0EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBLA0A0R4J4Z80.0A0A0R4J4Z8_SOYBN; Uncharacterized protein
STRINGGLYMA14G04550.10.0(Glycine max)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.10.0ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Kim HG, et al.
    GDSL LIPASE1 modulates plant immunity through feedback regulation of ethylene signaling.
    Plant Physiol., 2013. 163(4): p. 1776-91
    [PMID:24170202]
  3. Zhang GB,Yi HY,Gong JM
    The Arabidopsis ethylene/jasmonic acid-NRT signaling module coordinates nitrate reallocation and the trade-off between growth and environmental adaptation.
    Plant Cell, 2014. 26(10): p. 3984-98
    [PMID:25326291]
  4. Wang J, et al.
    Arabidopsis ROOT HAIR DEFECTIVE3 is involved in nitrogen starvation-induced anthocyanin accumulation.
    J Integr Plant Biol, 2015. 57(8): p. 708-21
    [PMID:25494721]
  5. Qing D, et al.
    Quantitative and Functional Phosphoproteomic Analysis Reveals that Ethylene Regulates Water Transport via the C-Terminal Phosphorylation of Aquaporin PIP2;1 in Arabidopsis.
    Mol Plant, 2016. 9(1): p. 158-174
    [PMID:26476206]
  6. Poulios S,Vlachonasios KE
    Synergistic action of histone acetyltransferase GCN5 and receptor CLAVATA1 negatively affects ethylene responses in Arabidopsis thaliana.
    J. Exp. Bot., 2016. 67(3): p. 905-18
    [PMID:26596766]
  7. Shen X,Li Y,Pan Y,Zhong S
    Activation of HLS1 by Mechanical Stress via Ethylene-Stabilized EIN3 Is Crucial for Seedling Soil Emergence.
    Front Plant Sci, 2016. 7: p. 1571
    [PMID:27822221]
  8. Abozeid A, et al.
    Ethylene Improves Root System Development under Cadmium Stress by Modulating Superoxide Anion Concentration in Arabidopsis thaliana.
    Front Plant Sci, 2017. 8: p. 253
    [PMID:28286514]
  9. Feng Y, et al.
    Ethylene promotes root hair growth through coordinated EIN3/EIL1 and RHD6/RSL1 activity in Arabidopsis.
    Proc. Natl. Acad. Sci. U.S.A., 2017. 114(52): p. 13834-13839
    [PMID:29233944]
  10. Harkey AF, et al.
    Identification of Transcriptional and Receptor Networks That Control Root Responses to Ethylene.
    Plant Physiol., 2018. 176(3): p. 2095-2118
    [PMID:29259106]