PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0093s0164.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 550aa MW: 62159.7 Da PI: 5.701 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 472 | 3.9e-144 | 41 | 411 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 +el++rmw+d+m++krl+er+k+ ke + g+kk+++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipe+gkpv+gasd+ Kaladp0093s0164.1.p 41 DELERRMWRDKMRIKRLRERQKS----KEGDDGSKKQQQSEEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPENGKPVTGASDN 126 79*******************98....66667899******************************************************* PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180 Lr+WWk+ v+fdrngpaai ky ++n i++ + s + + ++l+elqDTtlgSLLsalmqhcdppqrrfple+gv+pPWWPtG+e+w Kaladp0093s0164.1.p 127 LREWWKDRVRFDRNGPAAILKYMKDNSIPNPNGSH-MLVGPTTSTLQELQDTTLGSLLSALMQHCDPPQRRFPLERGVAPPWWPTGTEDW 215 ****************************9977777.5599999*********************************************** PP HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXX CS EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrk 269 w +lg++k qg+ppykkphdlkk wkv+vLtavikh++p++++ir+l+rqsk+lqdkm+ake+ ++l+v+nqee++++++++ s + + Kaladp0093s0164.1.p 216 WCQLGFPKTQGPPPYKKPHDLKKLWKVGVLTAVIKHIAPNFTKIRKLVRQSKCLQDKMTAKETSTWLAVINQEEAIARELYPPSViACFN 305 ***********************************************************************************8854444 PP XXXXXXXXXX.XXXXXX.....XXXXXX.XXXXXXXXXX..................XXXXXXXXXXXXXXXXXXXXX......XXXXXX CS EIN3 270 qspkvtlsce.qkedve.....gkkeskikhvqavktta..................gfpvvrkrkkkpsesakvsskevsrtcqssqfr 335 + + + +++ ++dv ++ ++ +h++ + t+ ++++ +krk+ ++ + +v + ++ c+s q++ Kaladp0093s0164.1.p 306 SYETFESEDDlGEYDVPlaglfDDQGKNLSHSNISNLTTdnttvfgsnygtqieaptNIDFSSKRKATSEVDGSVGRS--VYICDSPQCP 393 45555555442466777999984444444444444444445666**********************888888888766..8********* PP X.XXXXXXXXXXXXXXXX CS EIN3 336 gsetelifadknsisqne 353 + + +l+f+d+ s+++++ Kaladp0093s0164.1.p 394 YGDIRLGFQDRASRDNHQ 411 ****************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 3.9E-126 | 41 | 289 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 6.1E-72 | 165 | 297 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.07E-60 | 169 | 292 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 550 aa Download sequence Send to blast |
MGYDELDFLS GSHVEKILPA PQNESEVVLY EDSSDDDIDV DELERRMWRD KMRIKRLRER 60 QKSKEGDDGS KKQQQSEEQA RRKKMSRAQD GILKYMLKMM EVCNAQGFVY GIIPENGKPV 120 TGASDNLREW WKDRVRFDRN GPAAILKYMK DNSIPNPNGS HMLVGPTTST LQELQDTTLG 180 SLLSALMQHC DPPQRRFPLE RGVAPPWWPT GTEDWWCQLG FPKTQGPPPY KKPHDLKKLW 240 KVGVLTAVIK HIAPNFTKIR KLVRQSKCLQ DKMTAKETST WLAVINQEEA IARELYPPSV 300 IACFNSYETF ESEDDLGEYD VPLAGLFDDQ GKNLSHSNIS NLTTDNTTVF GSNYGTQIEA 360 PTNIDFSSKR KATSEVDGSV GRSVYICDSP QCPYGDIRLG FQDRASRDNH QLTCSFRNSS 420 SSLKNVNYQL KPLVFNPSYI QPASVDNEVV DSRQQVIGSM MSFYDNYAQR DSGQPQRMSL 480 DQNQVQAPHL SFNNQMLIQD SSLFGNPHLP FESLPDGNNV SMIYGGAQFD IHGGTLDLIS 540 KQDPATWFQ* |
3D Structure ? help Back to Top | ||||||
---|---|---|---|---|---|---|
PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 5e-76 | 167 | 299 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 5e-76 | 167 | 299 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Could bind the primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_003545483.1 | 0.0 | ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | Q9SLH0 | 0.0 | EIL1_ARATH; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
TrEMBL | A0A0R4J4Z8 | 0.0 | A0A0R4J4Z8_SOYBN; Uncharacterized protein | ||||
STRING | GLYMA14G04550.1 | 0.0 | (Glycine max) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G27050.1 | 0.0 | ETHYLENE-INSENSITIVE3-like 1 |
Link Out ? help Back to Top | |
---|---|
Phytozome | Kaladp0093s0164.1.p |