PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0081s0178.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | EIL | ||||||||
Protein Properties | Length: 605aa MW: 68729.4 Da PI: 5.9919 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 499.3 | 2e-152 | 49 | 420 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasds 90 +el+krmw+d+m+lkrlke++k k+ ++a+k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+ Kaladp0081s0178.1.p 49 DELEKRMWRDKMRLKRLKEQTKT----KDG-VDAAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDN 133 79******************997....677.9********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS EIN3 91 LraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180 Lr+WWk+kv+fdrngpaai+kyqa+nli++++++ ++ s++h+l+elqDTtlgSLLsalmqhcdppqrrfplekg++pPWWPtG+e+w Kaladp0081s0178.1.p 134 LREWWKDKVRFDRNGPAAIAKYQAENLIPGNSEGANS-VGSTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGEEEW 222 ******************************9999987.9*************************************************** PP HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX.XXXX CS EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss.slrk 269 w++l ++k+qg+ pykkphdlkkawkv+vLtavikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee ++++++++s + Kaladp0081s0178.1.p 223 WSQLDIPKNQGPLPYKKPHDLKKAWKVGVLTAVIKHMSPDISKIRKLVRQSKCLQDKMTAKESATWLAIINQEETLARELYPDSCfPSYG 312 ***********************************************************************************7754455 PP XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..........................XXXXXXXXXXXXXXXXXXXXX......XXXX CS EIN3 270 qspkvtlsceqkedvegkkeskikhvqavktta..........................gfpvvrkrkkkpsesakvsskevsrtcqssq 333 + ++ +++ ++dveg ++ + + q +k + +++++rkrk ++se + v ++ ++tc+ Kaladp0081s0178.1.p 313 DISSIGFNDCGEYDVEGPRDDHKFEYQDQKPIKltlpdlavkdtkgfttnqppysfvdvNVDIARKRK-PSSELNRVTEQ-NIYTCEFLP 400 88899999999*****988888789999999889***********************77777777777.55555556555.56******* PP XXX.XXXXXXXXXXXXXXXX CS EIN3 334 frgsetelifadknsisqne 353 +++se++l+f+d+ s+++++ Kaladp0081s0178.1.p 401 CPYSESHLGFHDRISRDNHQ 420 ******************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 7.0E-130 | 49 | 296 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 2.6E-74 | 169 | 306 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 2.62E-60 | 175 | 299 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 605 aa Download sequence Send to blast |
MMMFDEMGYC GDVNFFCAPP QVERVEPLQQ NELDGAVEDD YSDEELDVDE LEKRMWRDKM 60 RLKRLKEQTK TKDGVDAAKQ RQSQEQARRK KMSRAQDGIL KYMLKMMEVC KAQGFVYGII 120 PEKGKPVTGA SDNLREWWKD KVRFDRNGPA AIAKYQAENL IPGNSEGANS VGSTPHTLQE 180 LQDTTLGSLL SALMQHCDPP QRRFPLEKGI PPPWWPTGEE EWWSQLDIPK NQGPLPYKKP 240 HDLKKAWKVG VLTAVIKHMS PDISKIRKLV RQSKCLQDKM TAKESATWLA IINQEETLAR 300 ELYPDSCFPS YGDISSIGFN DCGEYDVEGP RDDHKFEYQD QKPIKLTLPD LAVKDTKGFT 360 TNQPPYSFVD VNVDIARKRK PSSELNRVTE QNIYTCEFLP CPYSESHLGF HDRISRDNHQ 420 LSCPFKSISS DPVVMQFHEG KSINFHQSIL QPNQAAQPAS LAQSTFSLPG VGVPEDGQRM 480 INGLMSYYDS NVQKNKFADS QNLNQNVPQP VPQHQHVKYS FNDSQGFAME NNFFDTPNIP 540 ASHHMFVQEQ GHLDPSKMLN PQFEMNHGGN TLQMIYGPTF DAVASDFSDG ISSTYPKQVS 600 VWYP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 3e-83 | 173 | 306 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 3e-83 | 173 | 306 | 1 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021892566.1 | 0.0 | protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_021892567.1 | 0.0 | protein ETHYLENE INSENSITIVE 3-like | ||||
Refseq | XP_021892569.1 | 0.0 | protein ETHYLENE INSENSITIVE 3-like | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A0R5PAD2 | 0.0 | A0A0R5PAD2_CARPA; Ethylene insensitive 3-like 1 | ||||
STRING | evm.model.supercontig_103.60 | 0.0 | (Carica papaya) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0081s0178.1.p |