PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0071s0068.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

NAC

Protein Properties

Length: 401aa MW: 45498.3 Da PI: 4.3883

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0071s0068.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	57.7	3.9e-18	9	142	6	128
NAM 6 rFhPtdeelvveyLkkk.vegkk..leleevikev.diykv.ePwdL.pkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 F+P+d++l++++L++k veg++ + + i+e+ diy Pw++ p + +e y F+k k + g+r nr+++ g+Wk + +d Kaladp0071s0068.1.p 9 GFKPSDKQLLDYFLRRKqVEGRElhRDSLSLIPEIdDIYGQrPPWEIfP-----DLREHYAFTKLVKLSDGGSRVNRKVNGGFWKLQKND 93 6***********99956666654334456889976478933.....56899************************98776 PP NAM 90 kevlsk..........kgelvglkktLvfykgrapkgektdWvmheyrl 128 + +++ g kk+L f + + + ++ ++W m ey+l Kaladp0071s0068.1.p 94 DVFDVDetsggderviRSKWFGKKKMLSFMSREGKMAKTSHWNMSEYTL 142 55444355665554444444******9999999999*****97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	25.25	4	158	IPR003441	NAC domain
SuperFamily	SSF101941	5.1E-20	8	157	IPR003441	NAC domain
Pfam	PF02365	1.4E-11	9	142	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence Send to blast
MEDDASSLGF KPSDKQLLDY FLRRKQVEGR ELHRDSLSLI PEIDDIYGQR PPWEIFPDLR 60 EHYAFTKLVK LSDGGSRVNR KVNGGFWKLQ KNDDVFDVDE TSGGDERVIR SKWFGKKKML 120 SFMSREGKMA KTSHWNMSEY TLPEWKHGDW VLCHVRFNHK AAAREEEKAA KDAVRMKGNV 180 EEQEAAASNN TFMKEQEDYV HAAPSLEWTC QDPNQLQPRR HSAQQQDLEV RAAGNVATVN 240 ENEFMQGVDS WEAPDHDFFL GLTPVDCIPP TQDCGLSENQ ERDAITDSVA EVALMQNNVD 300 PWNPNDIFLL GDLDANQEEL QQGVDSWEPP DNDFFLDSAP VDCVPSPPQE CGSFKNQKQD 360 ATTGGSMAQQ FVQKVDSWVP SDTFIRDLDA WAADEFAKMG *

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence Send to blast

MEDDASSLGF KPSDKQLLDY FLRRKQVEGR ELHRDSLSLI PEIDDIYGQR PPWEIFPDLR  60
EHYAFTKLVK LSDGGSRVNR KVNGGFWKLQ KNDDVFDVDE TSGGDERVIR SKWFGKKKML  120
SFMSREGKMA KTSHWNMSEY TLPEWKHGDW VLCHVRFNHK AAAREEEKAA KDAVRMKGNV  180
EEQEAAASNN TFMKEQEDYV HAAPSLEWTC QDPNQLQPRR HSAQQQDLEV RAAGNVATVN  240
ENEFMQGVDS WEAPDHDFFL GLTPVDCIPP TQDCGLSENQ ERDAITDSVA EVALMQNNVD  300
PWNPNDIFLL GDLDANQEEL QQGVDSWEPP DNDFFLDSAP VDCVPSPPQE CGSFKNQKQD  360
ATTGGSMAQQ FVQKVDSWVP SDTFIRDLDA WAADEFAKMG *

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10480.2	1e-12	NAC domain containing protein 50

Link Out ? help Back to Top
Phytozome	Kaladp0071s0068.1.p