PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0067s0043.1.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

VOZ

Protein Properties

Length: 494aa MW: 55346.2 Da PI: 6.3089

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0067s0043.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	433.9	2.3e-133	220	436	1	217
VOZ 1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspw 90 pppsaflgpkcalwdc+rpaqg +w+qdycssfha+la+neg+pg+tpvlrp+gi+lkd+llfaal akv+gk+vgipecegaat+kspw Kaladp0067s0043.1.p 220 PPPSAFLGPKCALWDCPRPAQGPDWCQDYCSSFHAALAFNEGPPGMTPVLRPNGIGLKDSLLFAALAAKVHGKDVGIPECEGAATTKSPW 309 89************************************************************************************** PP VOZ 91 naaelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldal 180 na+elfdls+legetirewlffdkprrafesgnrkqrslpdy+grgwhesrkqv++efgglkrsyymdpqp++++ewhlyeyei+++d + Kaladp0067s0043.1.p 310 NAPELFDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYNGRGWHESRKQVINEFGGLKRSYYMDPQPLKHYEWHLYEYEISKCDIC 399 ************************************************************************************** PP VOZ 181 alyrlelklvdekksakgkvskdsladlqkklgrlta 217 alyrlelkl+d+kk +kgk +dsladlqk++grlta Kaladp0067s0043.1.p 400 ALYRLELKLADGKKIPKGKTPSDSLADLQKQMGRLTA 436 *********************************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 494 aa Download sequence Send to blast
MERPRERVYF RGFVGKLGIL PMGKGSRSNC KSTSHKMFRD KAKNKVDDLQ GIFADLQYAR 60 KESRTTDAAL LEEQVHQMLR EWRAELNEPS PATSMQGGSL GSFSSDICRL LQLYEEEDDA 120 TSRLAAPKTE PDAPHSVQAQ DVAIEQVTLT NQLPQEHSYQ LGNDCKSSMA EMHNMGHNNI 180 GGVESREFQL HQDFEKSFYA LPEEDVNVMP NADFLPNICP PPSAFLGPKC ALWDCPRPAQ 240 GPDWCQDYCS SFHAALAFNE GPPGMTPVLR PNGIGLKDSL LFAALAAKVH GKDVGIPECE 300 GAATTKSPWN APELFDLSVL EGETIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR 360 KQVINEFGGL KRSYYMDPQP LKHYEWHLYE YEISKCDICA LYRLELKLAD GKKIPKGKTP 420 SDSLADLQKQ MGRLTAEFPS DHKFSAKGRI KIYPKDSHGH FATNQAAHAS DSGAGNGSTP 480 YYLVDNLDEY FLT*

Sequence ? help Back to Top

Protein Sequence Length: 494 aa Download sequence Send to blast

MERPRERVYF RGFVGKLGIL PMGKGSRSNC KSTSHKMFRD KAKNKVDDLQ GIFADLQYAR  60
KESRTTDAAL LEEQVHQMLR EWRAELNEPS PATSMQGGSL GSFSSDICRL LQLYEEEDDA  120
TSRLAAPKTE PDAPHSVQAQ DVAIEQVTLT NQLPQEHSYQ LGNDCKSSMA EMHNMGHNNI  180
GGVESREFQL HQDFEKSFYA LPEEDVNVMP NADFLPNICP PPSAFLGPKC ALWDCPRPAQ  240
GPDWCQDYCS SFHAALAFNE GPPGMTPVLR PNGIGLKDSL LFAALAAKVH GKDVGIPECE  300
GAATTKSPWN APELFDLSVL EGETIREWLF FDKPRRAFES GNRKQRSLPD YNGRGWHESR  360
KQVINEFGGL KRSYYMDPQP LKHYEWHLYE YEISKCDICA LYRLELKLAD GKKIPKGKTP  420
SDSLADLQKQ MGRLTAEFPS DHKFSAKGRI KIYPKDSHGH FATNQAAHAS DSGAGNGSTP  480
YYLVDNLDEY FLT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002273268.1	0.0	PREDICTED: transcription factor VOZ1
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	F6HM51	0.0	F6HM51_VITVI; Uncharacterized protein
STRING	VIT_10s0003g00500.t01	0.0	(Vitis vinifera)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Phytozome	Kaladp0067s0043.1.p

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]