PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0066s0113.4.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 344aa    MW: 38752.2 Da    PI: 7.5742
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0066s0113.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH469.2e-15109160155
                          CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          +r++h ++Er+RR+++ + ++ Lr+llP+a   ++++ + a+i+  A++Y+k+L+
  Kaladp0066s0113.4.p 109 QRMTHIAIERNRRRQMSDYLSVLRSLLPPA---YAERGDQASIVGGAIDYVKKLE 160
                          79****************************...*******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.72E-11107164No hitNo description
SuperFamilySSF474593.27E-17108179IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.847108159IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.107.4E-14109173IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.2E-12109160IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.9E-11114165IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    Send to blast
MPFLRMLHAL DPSITHSLLK KNPTETETQI LPVDCCITHD TPELHSPVMS EGKNPTQVSP  60
DGTLEERGEL NSVSECRQDS SSQLSCGKMR KPRKHAKVVV ENKKDVEKQR MTHIAIERNR  120
RRQMSDYLSV LRSLLPPAYA ERGDQASIVG GAIDYVKKLE QLLQSLQAQK RQRKVDEMRN  180
RCCSNSMPLS PETSDGISTS TSSSTASLDE DCDMNSPLEK KADINIRVVQ THVNLHIGCD  240
DMKQSELIKL LIALERLRLK ILHLNITSIH KSSFYSLSLN VEDECKLRST EEISSSIEQL  300
LNSINIYNGR RSSVTSKKED DAKMYGMPHH HPHGACKEIE HMM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1109120RMTHIAIERNRR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_027335453.11e-65transcription factor bHLH67
STRINGXP_008244210.15e-64(Prunus mume)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46810.11e-48bHLH family protein