PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0066s0113.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 339aa MW: 37480.7 Da PI: 6.6656 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 46.1 | 9e-15 | 152 | 203 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++ + ++ Lr+llP+a ++++ + a+i+ A++Y+k+L+ Kaladp0066s0113.3.p 152 QRMTHIAIERNRRRQMSDYLSVLRSLLPPA---YAERGDQASIVGGAIDYVKKLE 203 79****************************...*******************996 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 2.39E-12 | 150 | 207 | No hit | No description |
SuperFamily | SSF47459 | 3.14E-17 | 151 | 222 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.847 | 151 | 202 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 7.1E-12 | 152 | 203 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 7.2E-14 | 152 | 216 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.9E-11 | 157 | 208 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence Send to blast |
MEEGCCGGGE GGGPINLSAS FDGGVEPSAR SDFLTASLGL DDRMPFLRML HALDPSITHS 60 LLKKNPTETE TQILPVDCCI THDTPELHSP VMSEGKNPTQ VSPDGTLEER GELNSVSECR 120 QDSSSQLSCG KMRKPRKHAK VVVENKKDVE KQRMTHIAIE RNRRRQMSDY LSVLRSLLPP 180 AYAERGDQAS IVGGAIDYVK KLEQLLQSLQ AQKRQRKVDE MRNRCCSNSM PLSPETSDGI 240 STSTSSSTAS LDEDCDMNSP LEKKADINIR VVQTHVNLHI GCDDMKQSEL IKLLIALERL 300 RLKILHLNIT SIHKSSFYSL SLNVMLNSIT WVFTDIGF* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 152 | 163 | RMTHIAIERNRR |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
STRING | XP_008244210.1 | 3e-57 | (Prunus mume) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G46810.1 | 4e-41 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0066s0113.3.p |