PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0055s0183.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 301aa MW: 33899.2 Da PI: 6.5236 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 149.2 | 2e-46 | 12 | 138 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 pGfrFhPt++el+ +yLkk ++g++l+ +i+ v+iy ++Pw+Lp +k +e+ewyfF++rd+k+ tg r+nr+t++g+Wkatg+d+++ Kaladp0055s0183.1.p 12 PGFRFHPTEDELLEFYLKKIISGNSLPY-FAINFVNIYLHDPWHLPDLAKIGEREWYFFVPRDRKQGTGGRPNRTTANGFWKATGSDRRI 100 9**************************9.56***************8888899************************************* PP NAM 93 lsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ ++++gl+ktLvfy+grap+g ktdWvm+eyrl Kaladp0055s0183.1.p 101 ISTsePKRVIGLRKTLVFYRGRAPRGCKTDWVMNEYRL 138 *98666778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 53.859 | 10 | 161 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.89E-57 | 11 | 161 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-24 | 12 | 138 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MSADPKSDMD LPGFRFHPTE DELLEFYLKK IISGNSLPYF AINFVNIYLH DPWHLPDLAK 60 IGEREWYFFV PRDRKQGTGG RPNRTTANGF WKATGSDRRI ISTSEPKRVI GLRKTLVFYR 120 GRAPRGCKTD WVMNEYRLPD PHNHRSASSS QEIVLCKVYR KATSLKVLEQ RAAMDQDDEA 180 RGVTPPPHFL LLPRTPSNDS LSADFEQMLE SMKDGDEEGA VGIAAEGRSF GVSSSSEFMS 240 SSSSSSTSSS GLKFPVGMDV MADLQVPKLD ADWTQDQFWT QFNSPWLMNL TPSYINLLNL 300 * |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
3swm_B | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
3swm_C | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
3swm_D | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
3swp_A | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
3swp_B | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
3swp_C | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
3swp_D | 7e-48 | 3 | 164 | 12 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | NP_001314221.1 | 1e-110 | putative NAC domain-containing protein 94 | ||||
Refseq | XP_012449436.1 | 1e-110 | PREDICTED: protein FEZ-like | ||||
Refseq | XP_012449442.1 | 1e-110 | PREDICTED: protein FEZ-like | ||||
Refseq | XP_019465072.1 | 1e-110 | PREDICTED: NAC domain-containing protein 35-like isoform X1 | ||||
Swissprot | Q10S65 | 5e-83 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A0D2PYL5 | 1e-108 | A0A0D2PYL5_GOSRA; Uncharacterized protein | ||||
TrEMBL | A0A4P1R1R0 | 1e-108 | A0A4P1R1R0_LUPAN; Uncharacterized protein | ||||
TrEMBL | W6JBA7 | 1e-108 | W6JBA7_GOSHI; NAC domain protein NAC57 | ||||
STRING | Gorai.002G001900.1 | 1e-109 | (Gossypium raimondii) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-89 | NAC domain containing protein 36 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0055s0183.1.p |
Publications ? help Back to Top | |||
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