PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0050s0171.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family TALE
Protein Properties Length: 578aa    MW: 64554.8 Da    PI: 6.7965
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0050s0171.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox29.41.4e-093804171954
                          HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
             Homeobox  19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                          Fe   ++yp+ +e+  LA+++gL+ +qV++WF N R +
  Kaladp0050s0171.1.p 380 FEHflHPYPTDAEKHILARQTGLSRSQVSNWFINARVR 417
                          554459******************************88 PP
2BELL115.82.2e-37247315472
                 BELL   4 elqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 
                          elqk+ka+Lls+leeVd+rYk+y++q+++v+ssFea+ag g+a++Y +lA+ka+SrhFrcL+d i++qi
  Kaladp0050s0171.1.p 247 ELQKRKAQLLSMLEEVDRRYKHYCDQMKAVVSSFEAAAGSGAATVYSALASKAMSRHFRCLRDGIVDQI 315
                          89******************************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005741.8E-51171313IPR006563POX domain
PfamPF075269.8E-47177311IPR006563POX domain
PROSITE profilePS5007112.374358421IPR001356Homeobox domain
CDDcd000862.94E-12361422No hitNo description
SMARTSM003894.2E-10361425IPR001356Homeobox domain
SuperFamilySSF466891.11E-17362428IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.602.9E-28365427IPR009057Homeodomain-like
PfamPF059203.6E-18378417IPR008422Homeobox KN domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 578 aa     Download sequence    Send to blast
MNSSSTGFCY SDVSSAVNPS CIPAGHVNQI HTIDQSNPDQ MFSLTSNMEM IGYFPSANDD  60
QSSMVVTSNS WQDNHRLLVD DSSLGCAFSG EGTDQRRTSQ RLSLSLSSIN PSGGFESFEL  120
GHNSSPTPTA HHQTEDHQLR CLSSREGYYR KSLNSLQTEQ PSNLQIHQHV LPQLQLIRHS  180
KYLKPAQELL SDFCSLGSNQ SEQHHHYHSQ KMAPNQKVNR VSHWDHNVHA GADSSRSHNL  240
YSLELLELQK RKAQLLSMLE EVDRRYKHYC DQMKAVVSSF EAAAGSGAAT VYSALASKAM  300
SRHFRCLRDG IVDQIRATKK AMGEKDDRVS RGETPRLRLL DQTLRQQKAF QQLNMMESHP  360
WRPHRGLPER SVSVLRAWLF EHFLHPYPTD AEKHILARQT GLSRSQVSNW FINARVRLWK  420
PMVEEMYTEE TKEELENTSN NNTMSHPAAA HHQLEHENKP GPEQLIRIDS DCLSSIINHH  480
NSQDSHEPPP QPLLQIGAYN AVIELDFSSF SGSGVSLTLG LQQHGESGGV SLAFPSPAVG  540
DAPNGSMFYA SVMDGDQGQN LAYRSLMGAQ LLRDLAG*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4xrm_A1e-15367425563Homeobox protein Meis2
4xrm_B1e-15367425563Homeobox protein Meis2
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPlays a major role in ovule patterning and in determination of integument identity via its interaction with MADS-box factors. Formation of complex with AG-SEP dimers negatively regulates the carpel identity process and favors the maintenance of ovule identity. BEL1-STM complex maintains the indeterminacy of the inflorescence meristem. Required, with SPL, for cytokinin-induced PIN1 expression in ovules (PubMed:22786869). {ECO:0000269|PubMed:12244239, ECO:0000269|PubMed:17693535, ECO:0000269|PubMed:22786869}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018829277.10.0PREDICTED: homeobox protein BEL1 homolog isoform X1
RefseqXP_018829278.10.0PREDICTED: homeobox protein BEL1 homolog isoform X1
RefseqXP_018829279.10.0PREDICTED: homeobox protein BEL1 homolog isoform X1
RefseqXP_018829280.10.0PREDICTED: homeobox protein BEL1 homolog isoform X2
RefseqXP_018829281.10.0PREDICTED: homeobox protein BEL1 homolog isoform X2
SwissprotQ388971e-130BEL1_ARATH; Homeobox protein BEL1 homolog
TrEMBLA0A2I4FC980.0A0A2I4FC98_JUGRE; homeobox protein BEL1 homolog isoform X2
TrEMBLA0A2I4FCA00.0A0A2I4FCA0_JUGRE; homeobox protein BEL1 homolog isoform X1
STRINGEOY248260.0(Theobroma cacao)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41410.11e-107TALE family protein
Publications ? help Back to Top
  1. Yamada T,Sasaki Y,Hashimoto K,Nakajima K,Gasser CS
    CORONA, PHABULOSA and PHAVOLUTA collaborate with BELL1 to confine WUSCHEL expression to the nucellus in Arabidopsis ovules.
    Development, 2016. 143(3): p. 422-6
    [PMID:26700684]
  2. Lozano-Sotomayor P, et al.
    Altered expression of the bZIP transcription factor DRINK ME affects growth and reproductive development in Arabidopsis thaliana.
    Plant J., 2016. 88(3): p. 437-451
    [PMID:27402171]