PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0793.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 321aa MW: 35761.6 Da PI: 6.2914 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.6e-11 | 160 | 218 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +++ eLe+kv +L++e ++L ++ +l+ l++e+ Kaladp0048s0793.1.p 160 KRAKRILANRHSAARSKERKIKYTSELERKVHTLQTEATTLSAQVTMLQSDTNGLTAEN 218 9***********************************************99988888877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-14 | 156 | 220 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.576 | 158 | 221 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.0E-9 | 160 | 218 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.4E-9 | 160 | 214 | No hit | No description |
SuperFamily | SSF57959 | 7.74E-11 | 160 | 214 | No hit | No description |
CDD | cd14703 | 1.48E-21 | 161 | 210 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0007231 | Biological Process | osmosensory signaling pathway | ||||
GO:0008272 | Biological Process | sulfate transport | ||||
GO:0009294 | Biological Process | DNA mediated transformation | ||||
GO:0009652 | Biological Process | thigmotropism | ||||
GO:0009970 | Biological Process | cellular response to sulfate starvation | ||||
GO:0045596 | Biological Process | negative regulation of cell differentiation | ||||
GO:0051170 | Biological Process | nuclear import | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005829 | Cellular Component | cytosol | ||||
GO:0003682 | Molecular Function | chromatin binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association | ||||
GO:0051019 | Molecular Function | mitogen-activated protein kinase binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence Send to blast |
MFGGDRCGGF FPDINCMSIT PARTSNHRRA QSESFLQFPD DLFLDPDLDL FDSPPTIPSP 60 PVGVEVKPEP NPYARQRSLS VDDDFFDNLG LSNTGMMEGE GKQVVLGDAD DDDEGDIKTH 120 RRRHSFSVDG SVFEADSGFD GVKKAMAADK LAQLALIDPK RAKRILANRH SAARSKERKI 180 KYTSELERKV HTLQTEATTL SAQVTMLQSD TNGLTAENKE LKLRLQAMEQ QSHLREALNE 240 ALRNEVHRLK IETGQIPTSN GHTFSSRLPL QYPSQASSHF YGSHQAQQNH PQTQQSRTNT 300 NSNNQIPDRS VQSSFMDYSN * |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00184 | DAP | Transfer from AT1G43700 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024040740.1 | 1e-88 | transcription factor VIP1 | ||||
TrEMBL | V4V6M5 | 2e-87 | V4V6M5_9ROSI; Uncharacterized protein | ||||
STRING | XP_006434439.1 | 4e-88 | (Citrus clementina) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G43700.1 | 9e-63 | VIRE2-interacting protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0048s0793.1.p |