PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0048s0668.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 384aa MW: 40409.4 Da PI: 7.8065 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 66.4 | 4.8e-21 | 300 | 362 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 e+elkr+rrkq+NRe+ArrsR+RK+ae++eL++++++L++eN +L+ e+++ + e+++l se+ Kaladp0048s0668.1.p 300 ERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLKEENATLRAEVNRVRSEYEQLASEN 362 89**********************************************************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF07777 | 9.2E-26 | 1 | 96 | IPR012900 | G-box binding protein, multifunctional mosaic region |
Pfam | PF16596 | 1.7E-46 | 135 | 269 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.4E-18 | 294 | 360 | No hit | No description |
Pfam | PF00170 | 1.0E-19 | 300 | 362 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 5.8E-22 | 300 | 364 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 13.3 | 302 | 365 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.81E-11 | 303 | 359 | No hit | No description |
CDD | cd14702 | 4.12E-25 | 305 | 355 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 307 | 322 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 384 aa Download sequence Send to blast |
MGSNDAEKTS REKEPKTVPA ATQEQSSATS TGTVNAEWPV FQAFSPMPAH SYLASSPQAH 60 PYMWGVQHIV PPYGAPPPYV AMYPHHGGIY AHPSMPPGSY PFSPFAMPSP NGIVEASGNT 120 PGAVEADGKS SEGKEKLPIK RSKGSLGSLN MITGKNNDAA KASTASANGA YSKSGESGSE 180 GSTDGSDANS QNDSHLKSGD RQDSQEGTET SQNGSSLHGS QNGGSGTPNT APSQTTAAVP 240 IAPGGIPGPA TNLNIGMEYW GAPATSSVPL LQGKVPFTAA GRANVPGSRD IQPQIWVQDE 300 RELKRQRRKQ SNRESARRSR LRKQAECDEL AQRAEVLKEE NATLRAEVNR VRSEYEQLAS 360 ENASLKERLG SNPAKGIYEI GKG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 316 | 322 | RRSRLRK |
2 | 316 | 323 | RRSRLRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds to the G-box motif (5'-CACGTG-3') and other cis-acting elements with 5'-ACGT-3' core, such as Hex, C-box and as-1 motifs. Possesses high binding affinity to G-box, much lower affinity to Hex and C-box, and little affinity to as-1 element (PubMed:18315949). G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control (Probable). Binds to the G-box motif 5'-CACGTG-3' of LHCB2.4 (At3g27690) promoter. May act as transcriptional repressor in light-regulated expression of LHCB2.4. Binds DNA as monomer. DNA-binding activity is redox-dependent (PubMed:22718771). {ECO:0000269|PubMed:18315949, ECO:0000269|PubMed:22718771, ECO:0000305|PubMed:18315949}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00291 | DAP | Transfer from AT2G35530 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_007040724.1 | 0.0 | PREDICTED: bZIP transcription factor 16 | ||||
Refseq | XP_007040725.1 | 0.0 | PREDICTED: bZIP transcription factor 16 | ||||
Swissprot | Q501B2 | 1e-159 | BZP16_ARATH; bZIP transcription factor 16 | ||||
TrEMBL | A0A061G6P8 | 0.0 | A0A061G6P8_THECC; BZIP domain class transcription factor isoform 1 | ||||
STRING | EOY25226 | 0.0 | (Theobroma cacao) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G35530.1 | 1e-124 | basic region/leucine zipper transcription factor 16 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0048s0668.1.p |
Publications ? help Back to Top | |||
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