PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0048s0190.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family Nin-like
Protein Properties Length: 338aa    MW: 38294.4 Da    PI: 5.7124
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0048s0190.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK83.22.6e-26155204352
               RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                          k ++ +++s+yF++pi++AAkeL+++lT+LK++CR++GI+RWPhRk+ sl
  Kaladp0048s0190.1.p 155 KVLTRKMISQYFYMPITQAAKELNIGLTLLKKRCRELGIRRWPHRKLMSL 204
                          77999******************************************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151918.189137225IPR003035RWP-RK domain
PfamPF020425.4E-22157204IPR003035RWP-RK domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0051302Biological Processregulation of cell division
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MAAGGWPEFI SGFNDVISKD QALLPFSADF SGFPMLEWDY GLAAHESFLD PLPTKDEGLP  60
MMDHHNTPIH CQSFMDAYAL PNLYLSQETK MLTGHVADNN ELGAVVWNNQ LQHQNLYLQQ  120
QEDVVVSDEN EIRDVEAPGK KRARKVKEEQ IRSSKVLTRK MISQYFYMPI TQAAKELNIG  180
LTLLKKRCRE LGIRRWPHRK LMSLQTLITN VQELGRDEGE GSDEKLKMAV EVLERERKMM  240
EELPDMQLED KTKKLRQACF KANYKKRKMV GSGGASNNGG SSAQWNYSFR CGGSRSCTTS  300
LSSSYSGIKY LEDEEDDEMR SLLSDCFSSS DSNSLLF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18790.13e-57RWP-RK domain-containing protein