PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0047s0212.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | Dof | ||||||||
Protein Properties | Length: 202aa MW: 21393.5 Da PI: 8.219 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 121.6 | 2.8e-38 | 5 | 65 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +e++lkcprCds ntkfCyynny+lsqPr++Ck+C+ryWtkGG+lrn+PvGg++rk k+s Kaladp0047s0212.1.p 5 EEEKLKCPRCDSLNTKFCYYNNYNLSQPRHYCKSCKRYWTKGGSLRNIPVGGSSRKTTKRS 65 6899****************************************************98876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
ProDom | PD007478 | 1.0E-21 | 5 | 54 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 6.0E-33 | 7 | 63 | IPR003851 | Zinc finger, Dof-type |
PROSITE profile | PS50884 | 28.36 | 9 | 63 | IPR003851 | Zinc finger, Dof-type |
PROSITE pattern | PS01361 | 0 | 11 | 47 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MNFQEEEKLK CPRCDSLNTK FCYYNNYNLS QPRHYCKSCK RYWTKGGSLR NIPVGGSSRK 60 TTKRSSSSNS VTGKAAAPSS SNSAHRPESG PKHAFSDDQE STVLSMGGGA GGFGLSFSSL 120 SPSEGQLGHS ILGAMNGSGY GGFQSGLFGT AFGHKGLDSG TEVTNVSEGF LGIQHGNEQW 180 SSGGEHVWPD LAIYTPSPTF E* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_027336749.1 | 6e-52 | dof zinc finger protein DOF3.1-like | ||||
Swissprot | O82155 | 7e-36 | DOF17_ARATH; Dof zinc finger protein DOF1.7 | ||||
TrEMBL | A0A1U8ALW5 | 8e-50 | A0A1U8ALW5_NELNU; dof zinc finger protein DOF3.1-like | ||||
STRING | XP_010267036.1 | 1e-50 | (Nelumbo nucifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G51700.1 | 4e-30 | DOF zinc finger protein 1 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0047s0212.1.p |
Publications ? help Back to Top | |||
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