PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0043s0262.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 113aa MW: 13143.9 Da PI: 8.5531 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.2 | 3.6e-13 | 1 | 42 | 10 | 51 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +++NRe+ArrsR RK++ ++eL v L +eN+aL ++ ++ Kaladp0043s0262.1.p 1 MISNRESARRSRMRKQKHLDELWSQVTRLRTENHALLDKFNH 42 689*********************************988876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.4E-6 | 1 | 56 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.5E-12 | 1 | 46 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 8.2E-12 | 1 | 68 | No hit | No description |
PROSITE profile | PS50217 | 8.783 | 1 | 57 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 8.41E-15 | 1 | 41 | No hit | No description |
Pfam | PF00170 | 1.5E-10 | 1 | 42 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence Send to blast |
MISNRESARR SRMRKQKHLD ELWSQVTRLR TENHALLDKF NHVFESHSQV VQENVKLKDE 60 VSQLRKMIAD LQITSPETFL RELREMPCIT DNAREASLKS NHSISSSIDL LD* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 8 | 15 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002530800.1 | 1e-44 | basic leucine zipper 43 | ||||
Swissprot | Q9FMC2 | 5e-26 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | B9SXT1 | 3e-43 | B9SXT1_RICCO; Ocs element-binding factor, putative | ||||
STRING | XP_002530800.1 | 6e-44 | (Ricinus communis) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 2e-33 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0043s0262.1.p |
Publications ? help Back to Top | |||
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