PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0040s0681.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 211aa    MW: 24130.7 Da    PI: 10.4194
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0040s0681.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP232.81.7e-10106146451
                  AP2   4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                          + V++  k+ +W A I++      +k+++lg+ gt eeAa ++++a+ 
  Kaladp0040s0681.1.p 106 RVVYF--KNMKWQAAIKVD-----KKQIHLGTVGTQEEAAHLYDRAAY 146
                          77887..47*********4.....5********************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541711.57E-7107149IPR016177DNA-binding domain
SMARTSM003800.0012107161IPR001471AP2/ERF domain
PfamPF008472.8E-4111147IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.6E-6112151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    Send to blast
MVSVRKAWRK LMGLSPVQSS FVDPLADISS NEKKFDSPPL LSKPIIAHSI PPGVDQTMKD  60
DFRPSLNHLS ASSLTKEQPA PPISEFKRRK RHKRKQIQDQ ETCLMRVVYF KNMKWQAAIK  120
VDKKQIHLGT VGTQEEAAHL YDRAAYMCGR EPNFELSEVE KQELKQLNWD EFLEITRSTI  180
TSKKHQRRGI VSSRRRSVLS SQHSSSMDGE *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18795RRKRHKRKQ
28895RKRHKRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022847199.19e-63ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022847200.19e-63ethylene-responsive transcription factor-like protein At4g13040
RefseqXP_022847201.19e-63ethylene-responsive transcription factor-like protein At4g13040
TrEMBLA0A2I4E5R64e-59A0A2I4E5R6_JUGRE; ethylene-responsive transcription factor-like protein At4g13040
STRINGXP_009758059.11e-58(Nicotiana sylvestris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.11e-43ERF family protein