PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0037s0452.2.p

Organism

Kalanchoe laxiflora

Taxonomic ID

1670617

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

Dof

Protein Properties

Length: 279aa MW: 30824.2 Da PI: 9.4293

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0037s0452.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	115.7	1.8e-36	46	105	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 k++al+cprC+stntkfCyynny+ +qPry+CkaCrryWt+GG+lrnvPvGg++rk++k Kaladp0037s0452.2.p 46 KDHALNCPRCNSTNTKFCYYNNYNPTQPRYLCKACRRYWTQGGTLRNVPVGGSSRKKNKP 105 67899***************************************************9875 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	1.0E-23	44	104	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	2.6E-32	48	104	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	27.894	50	104	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	52	88	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence Send to blast
MDAAQWPKVL EIGLIEGSSG DNTASNSSSL HSKQDKNKKT RPPPNKDHAL NCPRCNSTNT 60 KFCYYNNYNP TQPRYLCKAC RRYWTQGGTL RNVPVGGSSR KKNKPSPIPS HFNSNKLFLD 120 LNPKQTNMLS NFSAPAPPTR GLMHESQDAD MGLYYANAHH FLPIPPTFEL SAASQGALSP 180 YHAPISEANT RLLYPSSGFH FQDIIKPTLN LCMDEGGGAT HHDRSHMGST GRIPYHFGDL 240 KQASATSSQN NNVSDQSNGR TRDSDNSLLY WNKHGLYN*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61850.3	4e-33	Dof family protein

Link Out ? help Back to Top
Phytozome	Kaladp0037s0452.2.p