PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0033s0196.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bZIP
Protein Properties Length: 158aa    MW: 17764.6 Da    PI: 5.6432
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0033s0196.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.55.8e-132785563
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                         ++ +r+ +NRe+ArrsR RK+++++ L   v +L +eN + +  +++ ++++   ++e+
  Kaladp0033s0196.1.p 27 RKRKRMNSNRESARRSRMRKQKQLDDLVAQVGQLRSENNQIIGGINSATQHYLDIEAEN 85
                         5779999*********************************9999999999887776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-92167No hitNo description
SMARTSM003386.1E-132387IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.1852588IPR004827Basic-leucine zipper domain
PfamPF001701.6E-92778IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.66E-112778No hitNo description
CDDcd147021.94E-182878No hitNo description
PROSITE patternPS0003603045IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 158 aa     Download sequence    Send to blast
MASSSGASSA STLMQNSGSE TDLLDERKRK RMNSNRESAR RSRMRKQKQL DDLVAQVGQL  60
RSENNQIIGG INSATQHYLD IEAENSVLRA QHQELNYRLQ YLNQIIGCLT RNSAPYEELD  120
ERCGYAFDDD IDGLLSQWHA PYLAQQPIAA SAEVFHF*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12647RKRKRMNSNRESARRSRMRKQK
23946RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010275578.29e-49PREDICTED: bZIP transcription factor 11-like
SwissprotC0Z2L59e-41BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A1U8B3Z62e-47A0A1U8B3Z6_NELNU; bZIP transcription factor 11-like
STRINGXP_010275577.13e-48(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.19e-42basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]