PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0029s0106.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 358aa MW: 40304.3 Da PI: 5.8877 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 151.1 | 5.4e-47 | 12 | 136 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 p+GfrFhP+deel+v+yL++kv++++l++ ++i+e+d+yk++Pw+L++k+ +++e yfFs+rd+ky++g r+nra++sgyWkatg+dk+ Kaladp0029s0106.1.p 12 PAGFRFHPSDEELIVHYLQPKVASRPLPA-SIIAEIDLYKYHPWELHQKALFGDDEFYFFSPRDRKYPNGLRPNRAAASGYWKATGTDKA 100 89***************************.89**************98777899************************************ PP NAM 92 vlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ +++++g+kk Lvfy gr p kt+W+m+eyrl Kaladp0029s0106.1.p 101 IVTSsGSKTIGVKKALVFYVGRPPA--KTEWMMDEYRL 136 *99868889*************999..*********98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.1E-57 | 9 | 163 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.885 | 11 | 163 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.4E-25 | 12 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 358 aa Download sequence Send to blast |
MERGPGTNFN FPAGFRFHPS DEELIVHYLQ PKVASRPLPA SIIAEIDLYK YHPWELHQKA 60 LFGDDEFYFF SPRDRKYPNG LRPNRAAASG YWKATGTDKA IVTSSGSKTI GVKKALVFYV 120 GRPPAKTEWM MDEYRLPETT KRPSRSKSTM RLDDWVLCRV RQKANTTKNL HRAPDPPKPE 180 SMRYLMQVED SLPAVTNNDN EMFKDDMYKH CPVLTSLLTG KPLRPIDTNQ WASPQEIYSS 240 CGSVYEDGSC SDASPMTVSS FGSSLDPLNG KQMQENSTGI PLPSKYLTNE NENSFFGEAQ 300 KMPSDDVMDL CSYLYYEADV FTPSPSSVDM TTDSVFADGY ICHFSSPSSK DHYLSEC* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3swm_A | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
3swm_B | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
3swm_C | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
3swm_D | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
3swp_A | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
3swp_B | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
3swp_C | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
3swp_D | 2e-61 | 2 | 169 | 11 | 174 | NAC domain-containing protein 19 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds DNA motifs 5'-CGT[AG](5N)NACG[ACT][AC][AT][ACG][ACT]-3' and 5'-CACG[ACT][AC][AT][AGT][CT]-3' in target genes promoters. Promotes leaf senescence (developmental, light-induced and ABA-induced senescence) and regulates fruit yield and sugar content, probably by establishing abscisic acid (ABA) homeostasis. Activates the expression of senescence and ABA associated genes including NCED1, ABCG40, CYP707A2, SAG113, SGR1 and PAO, by directly binding to their promoters. {ECO:0000269|PubMed:29760199}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Accumulates during age-dependent and dark-induced leaf senescence. Induced by abscisic acid (ABA). {ECO:0000269|PubMed:29760199}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010651145.2 | 1e-115 | PREDICTED: NAC domain-containing protein 72-like | ||||
Swissprot | K4BNG7 | 3e-70 | NAP2_SOLLC; NAC domain-containing protein 2 | ||||
TrEMBL | A0A438DTI4 | 1e-113 | A0A438DTI4_VITVI; NAC transcription factor ONAC010 | ||||
TrEMBL | F6GTZ4 | 1e-113 | F6GTZ4_VITVI; Uncharacterized protein | ||||
STRING | VIT_06s0004g03080.t01 | 1e-114 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 5e-70 | NAC-like, activated by AP3/PI |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0029s0106.1.p |
Publications ? help Back to Top | |||
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