PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0024s0265.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GeBP
Protein Properties Length: 425aa    MW: 46804.5 Da    PI: 7.8997
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0024s0265.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573117.29.4e-37190285297
               DUF573   2 lfqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifel 91 
                          lfqrl+se+Dei++L+G++++ ak+g +p+dd+++f++fvk+si+++v+  ql++Ki+rLKkK++++ +++k+g +++fsk+h+q +++l
  Kaladp0024s0265.1.p 190 LFQRLFSEDDEIAVLKGMLEYSAKKGIDPMDDLNDFHDFVKGSIHVDVTGAQLIDKIKRLKKKYENNARRSKTGVDKTFSKPHEQISYDL 279
                          79**************************************************************************************** PP

               DUF573  92 skkiWg 97 
                          skkiWg
  Kaladp0024s0265.1.p 280 SKKIWG 285
                          *****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.6E-32191285IPR007592Protein of unknown function DUF573
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005730Cellular Componentnucleolus
GO:0005829Cellular Componentcytosol
GO:0009507Cellular Componentchloroplast
GO:0016592Cellular Componentmediator complex
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MAPKKPTPFE HPPRADPSSD EEEDQEESGG SEEEEEPSLS QPKITKKSTL PPAAEKNSTL  60
SKKPELKPEE SSSDEDGSDS ASDSGSGSEV TPPAPDPSVK PISSKPAEDS PKVLAKRKLK  120
KPDAPPAVAS AVSVTKSAGK RPAEGKGDGK NPKKSKKVAD VEDRQVKEEA KKPAADEEVK  180
KVGEDSKKQL FQRLFSEDDE IAVLKGMLEY SAKKGIDPMD DLNDFHDFVK GSIHVDVTGA  240
QLIDKIKRLK KKYENNARRS KTGVDKTFSK PHEQISYDLS KKIWGFENAN ATSASNGGFE  300
LNANGKGKRT PKPNMTPDQK EKHASTLQIP KDIRVRNKQE RAPQDYSSSL FLAELMKSKD  360
AVRMGLSEEL LKRGLELLDD EMKARLEERW KNLLVAESEL HYQRLGLIRD QVKLSLDAYK  420
NSGH*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25210.12e-30DNA-binding storekeeper protein-related transcriptional regulator