PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0024s0132.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | NAC | ||||||||
Protein Properties | Length: 343aa MW: 38186.1 Da PI: 4.6484 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 37.5 | 6.9e-12 | 14 | 139 | 3 | 127 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikev...diykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknr.atksgyWk 84 G++++P+de lvv+ k+ ++ +el e i+++ ++ Pw+L +++a +k ++ sk +k++ +g+ +r a++ g+Wk Kaladp0024s0132.1.p 14 IGYKYDPSDELLVVF---SKIINSGMELPEPIRHMfpvIENSKSPWELFGlgdhRLQAASKVLFGLSKPEKRTGKGRMLKRkAASGGTWK 100 69*******999944...56666665665566665421335669****633555666666677888888888889998888788899*** PP NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 ++ kev ++ ++++vglk++L f +g++ + +W m e+r Kaladp0024s0132.1.p 101 SQRA-KEVEDArSKQVVGLKTVLSFREGDTAS----HWNMYEFR 139 9977.55555438889*********9777655....9******8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 17.85 | 12 | 156 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 9.42E-16 | 13 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.2E-7 | 14 | 139 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 343 aa Download sequence Send to blast |
MADFVFTAEG LESIGYKYDP SDELLVVFSK IINSGMELPE PIRHMFPVIE NSKSPWELFG 60 LGDHRLQAAS KVLFGLSKPE KRTGKGRMLK RKAASGGTWK SQRAKEVEDA RSKQVVGLKT 120 VLSFREGDTA SHWNMYEFRN TGWKAGDWVV CKFTYTPPKL LSASTIAARG KRLTTASRVP 180 SEEENTDHEE MMIRNPRTET IDHVNLLQDK KNTAVSVSNN VKSEAALKQP QEAQTLTNYT 240 AQPWPGVTIP NPTAEEEEVD GQAQMHSLAE DIIVEATVTT AVVEPSLWVN QIPVPASDFY 300 YPVDLETLEE ATIDQEAAAT LDEGLDLLIW GDEVCWTWSQ LL* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G76420.1 | 4e-07 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0024s0132.1.p |