PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0016s0057.1.p
Organism
Kalanchoe laxiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 349aa    MW: 38750.5 Da    PI: 8.4593
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0016s0057.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.99.8e-10185232455
                          HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-.STCHHHHHHHHHHHHHHH CS
                  HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskK.lsKaeiLekAveYIksLq 55 
                          +h+ +Er RR+ri +++  L+ l+P +     +K   Ka iL + ++Y++sLq
  Kaladp0016s0057.1.p 185 SHSLAERVRRERISERMKMLQALVPGC-----EKvTGKALILDEIINYVQSLQ 232
                          8*************************9.....6769****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.18E-11179236No hitNo description
SuperFamilySSF474591.44E-16179247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.3E-16181242IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.561181231IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.9E-7185232IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-9187237IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    Send to blast
MAAYSYQPHH FLLSSTLSPN TPFDISGFVN EGNITSKNST TVAFSNNLVS AEFLPMEVFH  60
EGFSDAAGVY QSSCHDHSSK MHSAASSFDM EKQVEEMGEQ VTQKLTPCNG HEEKKKKTRK  120
GSSLDSKRGK LQGGKAKKQK KSDNRQNVKE KKPKVDKKNQ KQEGSEDAQK DYIHVRARRG  180
QATDSHSLAE RVRRERISER MKMLQALVPG CEKVTGKALI LDEIINYVQS LQNQIEFLSM  240
KLGSFNPIYS NFVMDLDAAM LRQETLTRLA ASQPSGSSQQ CSPTAVNYNS STTTFTTPTT  300
VGYHPLIEAS LFLQQEAAEN LTWDQLDTQT QNLMNQFGGL ANAICSFQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015882267.14e-86transcription factor bHLH137 isoform X1
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.25e-47bHLH family protein