PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0005s0063.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bHLH | ||||||||
Protein Properties | Length: 266aa MW: 29479.1 Da PI: 7.3603 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.3 | 4.1e-11 | 155 | 202 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka+iL + ++Y++sLq Kaladp0005s0063.1.p 155 SHSLAERVRREKIGERMKLLQSLVPGC----DKIAGKAQILDEIINYVQSLQ 202 8*************************9....899*****************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.40E-10 | 149 | 206 | No hit | No description |
SuperFamily | SSF47459 | 2.75E-16 | 149 | 217 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 15.44 | 151 | 201 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 2.9E-16 | 151 | 213 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.6E-8 | 155 | 202 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 6.7E-10 | 157 | 207 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence Send to blast |
MSGFSYHHDH SDSSSLQSNN NFVHVPTPFQ QDDTVLWRHS NNECFQDYFP FHQFQSKEAN 60 YGLSAAAAAR HDAEVPSSAI VCGLRASYIA GPNAEMGVAQ TPKRRKNINS KKIPPKQNYE 120 KKSKGGQKEK EQVSGTPPVM EYIHVRARRG QATDSHSLAE RVRREKIGER MKLLQSLVPG 180 CDKIAGKAQI LDEIINYVQS LQTQVQVLVG KMAVLSPYMS DNEANLGAAL PASAEVRLCE 240 MDVQAGHFGA IDDQYWLDHL AQVDQ* |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010536589.1 | 9e-41 | PREDICTED: transcription factor bHLH137 isoform X1 | ||||
Refseq | XP_010536590.1 | 9e-41 | PREDICTED: transcription factor bHLH137 isoform X2 | ||||
Refseq | XP_010536591.1 | 9e-41 | PREDICTED: transcription factor bHLH137 isoform X1 | ||||
Swissprot | Q93W88 | 9e-40 | BH137_ARATH; Transcription factor bHLH137 | ||||
TrEMBL | A0A3S3N2E5 | 2e-39 | A0A3S3N2E5_9MAGN; Transcription factor bHLH137 | ||||
STRING | XP_010536590.1 | 4e-40 | (Tarenaya hassleriana) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G50915.2 | 2e-31 | bHLH family protein |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0005s0063.1.p |
Publications ? help Back to Top | |||
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