PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0003s0128.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | bZIP | ||||||||
Protein Properties | Length: 146aa MW: 16424.7 Da PI: 5.2913 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.7 | 1.2e-13 | 24 | 75 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 k+ +r+ +NRe+ArrsR +K+++++ L v +L +eN+++ +++ ++ + Kaladp0003s0128.1.p 24 KKRKRMLSNRESARRSRIKKQKQMDDLIGQVSQLRSENDQMMQKIAATEQSY 75 899***************************************9998887766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.1E-15 | 20 | 84 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-12 | 22 | 75 | No hit | No description |
PROSITE profile | PS50217 | 10.588 | 22 | 74 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.0E-11 | 24 | 73 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.13E-12 | 24 | 78 | No hit | No description |
CDD | cd14702 | 3.07E-18 | 25 | 76 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 27 | 42 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006971 | Biological Process | hypotonic response | ||||
GO:0009267 | Biological Process | cellular response to starvation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000693 | Biological Process | positive regulation of seed maturation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence Send to blast |
MDVKKQAASS GSDGSPLSGV IDEKKRKRML SNRESARRSR IKKQKQMDDL IGQVSQLRSE 60 NDQMMQKIAA TEQSYMYVAA ERDVLQAEAM ALSNRLQSLN EFIFMAEEVH ELAVDIPEIP 120 ESFVEPWQLP CQAPQFTASA NMFHC* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00419 | DAP | Transfer from AT3G62420 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_021904530.1 | 4e-49 | bZIP transcription factor 53 | ||||
TrEMBL | A0A218VQT1 | 5e-46 | A0A218VQT1_PUNGR; Uncharacterized protein | ||||
STRING | evm.model.supercontig_18.43 | 2e-48 | (Carica papaya) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G62420.1 | 2e-43 | basic region/leucine zipper motif 53 |
Link Out ? help Back to Top | |
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Phytozome | Kaladp0003s0128.1.p |