PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00758_0010p
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family MYB
Protein Properties Length: 468aa    MW: 53627.5 Da    PI: 9.6058
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00758_0010pgenomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.41.2e-11277318145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                      +grW+ eE+e+l  +++qlG++ W  I ++mg  R +  ck++w+
   kfl00758_0010p 277 KGRWSREEEERLQTLHAQLGPK-WVQIGSMMG--RLPDACKDKWR 318
                      79******************99.********9..7777******7 PP
2Myb_DNA-binding30.11.1e-09327393148
                      TSSS-HHHHHHHHHHHHHTTTT....................-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg....................tWktIartmgkgRtlkqcksrwqkyl 48 
                      +g W++ E e+l ++v++  +                     +W++I+++mg  Rt++qc  +w+++l
   kfl00758_0010p 327 KGQWSPKESEQLSRLVQESLSQkrirtsvervvdgrqvrddiDWTAISARMG-VRTANQCLRHWYDVL 393
                      799***************99889*****************************.9***********875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.3E-6197266IPR009057Homeodomain-like
PROSITE profilePS500905.912198271IPR017877Myb-like domain
SMARTSM007174.5E-5202273IPR001005SANT/Myb domain
SuperFamilySSF466891.84E-13251319IPR009057Homeodomain-like
PROSITE profilePS5129412.516272325IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.6E-10274318IPR009057Homeodomain-like
SMARTSM007175.1E-8276323IPR001005SANT/Myb domain
PfamPF139212.6E-10280338No hitNo description
PROSITE profilePS500908.327322393IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.607.8E-12324397IPR009057Homeodomain-like
SMARTSM007178.9E-10326395IPR001005SANT/Myb domain
CDDcd001672.23E-4330393No hitNo description
SuperFamilySSF466898.98E-12373457IPR009057Homeodomain-like
SMARTSM0071743403454IPR001005SANT/Myb domain
PROSITE profilePS500906.876407452IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MEDSLGSPKK KRKARLLAGE EGVERRETGQ KEKPPSDRDG AEKRKKARKE VTLSEDVTKD  60
RKGEREEKTV SEQDGAKDQK KRKKKKHRTT EEAPQAEDTG KEMELVEAVE PTKKGKHQVE  120
TRLEKGDEER RKKKKKKKEK KARTAEEGAI VLTSEEPNDR APEAARGQSP AKEISDYEGE  180
AIVLSGDRAE HWKDDDVRTD LKYGAFSKEE DEIIRAAVAE YIEERNLGED GIEKLLNTRK  240
HKEVQGAWLE IARCLPERSV KRVHARACRL LHGGNYKGRW SREEEERLQT LHAQLGPKWV  300
QIGSMMGRLP DACKDKWRII GVTDKKKGQW SPKESEQLSR LVQESLSQKR IRTSVERVVD  360
GRQVRDDIDW TAISARMGVR TANQCLRHWY DVLAPGMVRT GTGVEEWGGE DDQLMLQRIV  420
ESGATSEPEV EWASLLPHRD GTACRKRWRM MIKHLPPSQD FERNLASL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5eyb_A9e-1320446097338DNA-binding protein reb1
5eyb_B9e-1320446097338DNA-binding protein reb1
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17983KKRKK
2128134ERRKKKK
3129135RRKKKKK
4130138RKKKKKKKE
5130139RKKKKKKKEK
6131137KKKKKKK
7131140KKKKKKKEKK
8132140KKKKKKEKK
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1IKR60.0A0A1Y1IKR6_KLENI; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP53221418
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.15e-44MYB_related family protein