PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00393_0070

Common Name

KFL_003930070

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

Protein Properties

Length: 1157aa MW: 121358 Da PI: 6.2633

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00393_0070	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	32.1	2.1e-10	627	734	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE................EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy..............rkksgryvltkGWkeFvkangLkegDfvvF 82 f v++ps+v+ +l +p + a+++++ ++ +t+e+ g + +v + + ks++ +++GWk+F++++gL +gD vvF kfl00393_0070 627 FMRVMLPSHVGGGYWLGVPIPTANRFMKR--GQCAVTFES-GGSKHSVVWLWrapdrpprngeksqKTKSDSRGFSGGWKGFARDHGLVTGDAVVF 719 66788899999999999999999888644..555788877.44444444445556666766655554455556789******************** PP EE-SSSEE..EEEEE-S CS B3 83 kldgrsefelvvkvfrk 99 + +g+++f ++++fr+ kfl00393_0070 720 EKVGNRRF--RLHLFRR 734 *7777777..8888876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:2.40.330.10	1.1E-13	625	735	IPR015300	DNA-binding pseudobarrel domain
CDD	cd10017	5.06E-15	625	723	No hit	No description
SuperFamily	SSF101936	2.94E-16	625	736	IPR015300	DNA-binding pseudobarrel domain
Pfam	PF02362	2.5E-8	627	734	IPR003340	B3 DNA binding domain
SMART	SM01019	3.8E-8	627	735	IPR003340	B3 DNA binding domain
PROSITE profile	PS50863	11.152	627	735	IPR003340	B3 DNA binding domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 1157 aa Download sequence Send to blast
MVALFHPLIV KQEPLDEAPQ TSHDPSFARP PFLEVKLEVF KESSQSRPTP TSSQSSTPAS 60 PQRSALIDPS KGPEGLHEAK EGEFRGVRET KDVASDKASA VEAENSVRDL DPWGRQMHSQ 120 SATAGSVDAL GGEATDGALH AAAQDECSPL APCEYPPPAQ AAAADEAERL REDLRKMSVM 180 MARLQDKVLA TCGQTTEEFA EVQRLLDKNQ SLLHQPLALE QGFGSRIEPS EGALVEWKSG 240 VIDREGSEGE RGGGSGASET EQNGTANEKG APGEADAPDM FGSSVTGVRS TDSENRQGAL 300 GRSSPSEAGP RRATMSADVD SAGGPCTPGK DGPVVAPQRG NESICDIEER VLAALGDEPR 360 VRSSKGSVSE DDLTAGGVTG GESGTPSAKT GATEGLHSAP RFGESPLGDP FSPTTPAKTA 420 TKTGGEMAES LTPPGGETSP GASEVLSTAG ADEHEHSGVN GHLSETVRLG LDCPPALDPF 480 DGDVGSGLED NDDGFDSEPE ETPLIEEERI AIVPMVMPLL FAESEEEEEG GLREPDGVAV 540 EPVGGNLAVP EEDVCEPEVV KKKAKKPAKG PGRKHVAGGS KGRKSKGGKV GKGGGVADKG 600 SNTTRGEATP DEQRAWKSYD RVFKRSFMRV MLPSHVGGGY WLGVPIPTAN RFMKRGQCAV 660 TFESGGSKHS VVWLWRAPDR PPRNGEKSQK TKSDSRGFSG GWKGFARDHG LVTGDAVVFE 720 KVGNRRFRLH LFRRSALGGS VEKAAKAANE LAERLDGEGG GKGLELSGGQ KKRAAGGDET 780 EVGDGRSVAK QAKPANVSGD GTTGGTTGTG VPGGVANKQR RGLDEGMDGV LTEKRRKVGV 840 DERGGKRAEK NGISLIGSSA PGVELQTAAE RRVRASGSSV GTADAVKGAV IDELTDKKKR 900 PKVEDSTKPE KGPLAERPST GERMDMEWNK EKRGLVGQPP AQGDPPVGTR QAKVTEIFPV 960 VKRAKVGVSK DSAKREEGRS GTKVNGAEAQ SSPAGNADVT AVTTAGRKPE RTGGSGGAKR 1020 IKHTPKRGVS QVLGGKKRAR DEGKEPPKKL QKGARGGVVP EERNGGTTEE PEAEYEGGRL 1080 VHYVDGGHRY VEASEADKGA AKVAMERCAS AFPTFRVALS KSQTDKGFRL GGMTDFFRQN 1140 GGEPFRITAL ADAHRCI

Sequence ? help Back to Top

Protein Sequence Length: 1157 aa Download sequence Send to blast

MVALFHPLIV KQEPLDEAPQ TSHDPSFARP PFLEVKLEVF KESSQSRPTP TSSQSSTPAS  60
PQRSALIDPS KGPEGLHEAK EGEFRGVRET KDVASDKASA VEAENSVRDL DPWGRQMHSQ  120
SATAGSVDAL GGEATDGALH AAAQDECSPL APCEYPPPAQ AAAADEAERL REDLRKMSVM  180
MARLQDKVLA TCGQTTEEFA EVQRLLDKNQ SLLHQPLALE QGFGSRIEPS EGALVEWKSG  240
VIDREGSEGE RGGGSGASET EQNGTANEKG APGEADAPDM FGSSVTGVRS TDSENRQGAL  300
GRSSPSEAGP RRATMSADVD SAGGPCTPGK DGPVVAPQRG NESICDIEER VLAALGDEPR  360
VRSSKGSVSE DDLTAGGVTG GESGTPSAKT GATEGLHSAP RFGESPLGDP FSPTTPAKTA  420
TKTGGEMAES LTPPGGETSP GASEVLSTAG ADEHEHSGVN GHLSETVRLG LDCPPALDPF  480
DGDVGSGLED NDDGFDSEPE ETPLIEEERI AIVPMVMPLL FAESEEEEEG GLREPDGVAV  540
EPVGGNLAVP EEDVCEPEVV KKKAKKPAKG PGRKHVAGGS KGRKSKGGKV GKGGGVADKG  600
SNTTRGEATP DEQRAWKSYD RVFKRSFMRV MLPSHVGGGY WLGVPIPTAN RFMKRGQCAV  660
TFESGGSKHS VVWLWRAPDR PPRNGEKSQK TKSDSRGFSG GWKGFARDHG LVTGDAVVFE  720
KVGNRRFRLH LFRRSALGGS VEKAAKAANE LAERLDGEGG GKGLELSGGQ KKRAAGGDET  780
EVGDGRSVAK QAKPANVSGD GTTGGTTGTG VPGGVANKQR RGLDEGMDGV LTEKRRKVGV  840
DERGGKRAEK NGISLIGSSA PGVELQTAAE RRVRASGSSV GTADAVKGAV IDELTDKKKR  900
PKVEDSTKPE KGPLAERPST GERMDMEWNK EKRGLVGQPP AQGDPPVGTR QAKVTEIFPV  960
VKRAKVGVSK DSAKREEGRS GTKVNGAEAQ SSPAGNADVT AVTTAGRKPE RTGGSGGAKR  1020
IKHTPKRGVS QVLGGKKRAR DEGKEPPKKL QKGARGGVVP EERNGGTTEE PEAEYEGGRL  1080
VHYVDGGHRY VEASEADKGA AKVAMERCAS AFPTFRVALS KSQTDKGFRL GGMTDFFRQN  1140
GGEPFRITAL ADAHRCI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	586	594	GGKVGKGGG

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A0U9HKF6	0.0	A0A0U9HKF6_KLENI; Uncharacterized protein

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	7e-16	B3 family protein

Publications ? help Back to Top
Hori K, et al. Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation. Nat Commun, 2014. 5: p. 3978 [PMID:24865297]