PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00137_0050
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family MYB_related
Protein Properties Length: 500aa    MW: 54010.3 Da    PI: 9.5945
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00137_0050genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.41.7e-1394138347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ l++ + ++lG+g+W+ I+rt  + Rt+ q+ s+ qky
    kfl00137_0050  94 PWTEEEHRLFLLGLQKLGKGDWRGISRTYVQSRTPTQVASHAQKY 138
                      7*******************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129417.75287143IPR017930Myb domain
SuperFamilySSF466893.81E-1789144IPR009057Homeodomain-like
TIGRFAMsTIGR015571.6E-1790142IPR006447Myb domain, plants
SMARTSM007173.2E-891141IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.6E-1094137IPR009057Homeodomain-like
CDDcd001671.95E-994139No hitNo description
PfamPF002495.1E-1094138IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000122Biological Processnegative regulation of transcription from RNA polymerase II promoter
GO:0009651Biological Processresponse to salt stress
GO:0009723Biological Processresponse to ethylene
GO:0009737Biological Processresponse to abscisic acid
GO:0009739Biological Processresponse to gibberellin
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0030307Biological Processpositive regulation of cell growth
GO:0046686Biological Processresponse to cadmium ion
GO:0048366Biological Processleaf development
GO:2000469Biological Processnegative regulation of peroxidase activity
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 500 aa     Download sequence    Send to blast
MTRRCSHCAQ QNHNSRTCPE RGVRLFGVRI HDQGAGEMSE SMRKSVSMGN LSNYSGATVD  60
AADPGDEDRG NAAADGYLSD GLVHGARDRK RGIPWTEEEH RLFLLGLQKL GKGDWRGISR  120
TYVQSRTPTQ VASHAQKYFI RQSNMNKRKR RSSLFDLVTD LTPSISAPNL RSSASSDDIR  180
SPGMPPLSPN PAAPSFGPPA TFFDPTRKQS NFPLPSSSYP PPQFHFPNFP PPVSHGRLAT  240
SYSTPNHFPA NIPFSPPNYI SPGFGGSLVH PPMLARHSTY PQFPLPPVQM TSSNGMTNGM  300
TSGLTRQQQM AAVTEMVRAT SYERLHDLGG ASNSEQRTEV TKPIPHKASP SHPPPQPQPP  360
HELDEKLRDA DPTAQQASQH SFASPPFHNF SHLPWFSMGP FAYGMMQNGL SGAVNQTSSK  420
VCRPTASHPS APLDIPGCSG RGEDAQAPGE GASPSLLEPS PLSARLLGEG PLRHSAFQSK  480
LSYKNGGMSN GDGNSVIGVV
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00551DAPTransfer from AT5G47390Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HWX00.0A0A1Y1HWX0_KLENI; Myb domain protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP3941699
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47390.18e-53MYB_related family protein