PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

kfl00066_0170

Organism

Klebsormidium flaccidum

Taxonomic ID

3175

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium

Family

bHLH

Protein Properties

Length: 866aa MW: 91735.3 Da PI: 5.8707

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
kfl00066_0170	genome	KFGP	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.4	5.2e-08	144	194	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+++++ rE+ Rdr+N+ f+eL +l + + +K++Ka+iL v+ +k+L kfl00066_0170 144 RKEMKSNREKLLRDRMNEHFAELAGVLDPG---RPPKNDKASILNDGVNVVKKL 194 6889999********************8...89*********99999988 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:4.10.280.10	9.4E-9	143	216	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profile	PS50888	12.938	143	194	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Pfam	PF00010	1.2E-5	144	194	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamily	SSF47459	7.46E-10	144	221	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	6.57E-7	144	199	No hit	No description
SMART	SM00353	6.5E-4	149	200	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 866 aa Download sequence Send to blast
MADHNRNPWL PDHVPGPYQQ SLSLDFPFNP VSNEDGGFLD GLMYNPLAVQ NGQGHIEGYA 60 RLGVEDAKPQ PDLSGEGTHG QSSWLRGGER MQYEGGGHGG SGNLTFLHQQ QLQPMNRAEG 120 SAGTAMGPSD SGTRSQDDEV HAARKEMKSN REKLLRDRMN EHFAELAGVL DPGRPPKNDK 180 ASILNDGVNV VKKLRDDIAK LQSEHALLMD ESKELTAEKN ELREERMQVK AEKEALERRL 240 QSMLSWINFN PSLMMAALTN NAQAPPLDGS AAAPPQQDAQ APPHVDPSSN SALPEANPPH 300 GGVQGSAVVE GGQSGGGVPR LMQPSNEGRE RLGEAGVRDA FSGGGAGQQG GGVGVTLGSR 360 QAPAPAAEGS NQEKISQRGG SMHHPTRPQA AHFRPPILPP PAQRNPTGLR NLQPKPPGNP 420 PPTQARQLGP PPSRPVAPQQ QRKVPRTQPS APRQPPPQQN PRVLPAPSVA APSQPGPTRI 480 GREHGAQPAS RQPETARQDS LDSRVAKGRH VAAPGPSMVA PTAEKSTAQV SSSVRSEPAR 540 QEAEKPVAPA PPLQQPHPYP PGFAPMPYMG AFPGMMGMHP YSYPPQMAIP NAGTPPPDNA 600 QQAPPAPYPY HGYGYGQPGN PPGYPYPMFP AGHHPMAYAP FGYAPPYGAP GMFAPPPGGQ 660 QPQAEPPRPA NVQRPSATKV AQVHLPAGND ATEEGQVGAE TREATPEDGG RTTESFAEPV 720 NEAGTFDARF EEQQRTGEGH EQPETADTQA AKRARVDTSE EEAARPLDDE AAPEEWAGAL 780 PGQAQELSPA ASPERLQQPE LSPQGGVERD RSVAQGLQSS PLGMGSQLSN CSSSSSGSRC 840 GDVWTGSFQS ALELPENDPT IRPPAA

Sequence ? help Back to Top

Protein Sequence Length: 866 aa Download sequence Send to blast

MADHNRNPWL PDHVPGPYQQ SLSLDFPFNP VSNEDGGFLD GLMYNPLAVQ NGQGHIEGYA  60
RLGVEDAKPQ PDLSGEGTHG QSSWLRGGER MQYEGGGHGG SGNLTFLHQQ QLQPMNRAEG  120
SAGTAMGPSD SGTRSQDDEV HAARKEMKSN REKLLRDRMN EHFAELAGVL DPGRPPKNDK  180
ASILNDGVNV VKKLRDDIAK LQSEHALLMD ESKELTAEKN ELREERMQVK AEKEALERRL  240
QSMLSWINFN PSLMMAALTN NAQAPPLDGS AAAPPQQDAQ APPHVDPSSN SALPEANPPH  300
GGVQGSAVVE GGQSGGGVPR LMQPSNEGRE RLGEAGVRDA FSGGGAGQQG GGVGVTLGSR  360
QAPAPAAEGS NQEKISQRGG SMHHPTRPQA AHFRPPILPP PAQRNPTGLR NLQPKPPGNP  420
PPTQARQLGP PPSRPVAPQQ QRKVPRTQPS APRQPPPQQN PRVLPAPSVA APSQPGPTRI  480
GREHGAQPAS RQPETARQDS LDSRVAKGRH VAAPGPSMVA PTAEKSTAQV SSSVRSEPAR  540
QEAEKPVAPA PPLQQPHPYP PGFAPMPYMG AFPGMMGMHP YSYPPQMAIP NAGTPPPDNA  600
QQAPPAPYPY HGYGYGQPGN PPGYPYPMFP AGHHPMAYAP FGYAPPYGAP GMFAPPPGGQ  660
QPQAEPPRPA NVQRPSATKV AQVHLPAGND ATEEGQVGAE TREATPEDGG RTTESFAEPV  720
NEAGTFDARF EEQQRTGEGH EQPETADTQA AKRARVDTSE EEAARPLDDE AAPEEWAGAL  780
PGQAQELSPA ASPERLQQPE LSPQGGVERD RSVAQGLQSS PLGMGSQLSN CSSSSSGSRC  840
GDVWTGSFQS ALELPENDPT IRPPAA

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
TrEMBL	A0A1Y1HSX3	0.0	A0A1Y1HSX3_KLENI; Helix-loop-helix DNA-binding superfamily protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Representative plant	OGRP755	17	66

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19860.1	7e-29	bHLH family protein