PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID kfl00027_0450
Organism
Klebsormidium flaccidum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Klebsormidiophyceae; Klebsormidiales; Klebsormidiaceae; Klebsormidium
Family C2H2
Protein Properties Length: 311aa    MW: 34314.2 Da    PI: 7.6001
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
kfl00027_0450genomeKFGPView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.50.00044104126223
                    EETTTTEEESSHHHHHHHHHH.T CS
        zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                    +C  Cg+ F++  +L  H +  H
  kfl00027_0450 104 SCRVCGRAFPTVRLLSIHVSEsH 126
                    6*****************99877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003551776101IPR015880Zinc finger, C2H2-like
PROSITE patternPS00028078101IPR007087Zinc finger, C2H2
SMARTSM003550.6103126IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280105126IPR007087Zinc finger, C2H2
SMARTSM003550.038141166IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280143167IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MILAKETDQG MDEADNDKFV FPMLIGRKQR RPPDDPFFRT GDEERELLAK QAALELSPEE  60
ATQLVVDDKP PGGHGWTCPF SSCSVHLDGP AAYDQHYSAA HVNSCRVCGR AFPTVRLLSI  120
HVSESHDAFF QAKAARGFPV YECLVEGCGG KFQNAAARQQ HLRDRHHFAA SFVFGKGNRK  180
QWPVEQPGKR TDRNRGEETR TGGGNSKGRK NGGVVTERND KPVSNGHIDV SEKAEGIATC  240
EAPSEAGPGD VSSMDVEDLS KGFSRLSTTG EGVEIPRNIT FGRHRGRLFD ESLLSRKQID  300
KSQRLTRTLH T
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A1Y1HL010.0A0A1Y1HL01_KLENI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP75381313
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14140.16e-46zinc ion binding;nucleic acid binding;zinc ion binding