PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00032402-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 157aa    MW: 17551.9 Da    PI: 9.5448
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00032402-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.71.2e-132888363
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                        elk+ +r+++NRe+ArrsR +K++ +++L   v  L +eNk  +  ++  ++++ + ++e+
  WALNUT_00032402-RA 28 ELKKRKRMISNRESARRSRMKKQKHLDNLISQVTHLRKENKHIITSVNITTQHYLNIEAEN 88
                        79****************************************9999998888888777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-162690IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.8292891IPR004827Basic-leucine zipper domain
PfamPF001702.0E-112874IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.6E-1030102No hitNo description
SuperFamilySSF579591.69E-123083No hitNo description
CDDcd147025.87E-193181No hitNo description
PROSITE patternPS0003603348IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009845Biological Processseed germination
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MASSSGTCSG STLMHNSGSE EDLKAMLELK KRKRMISNRE SARRSRMKKQ KHLDNLISQV  60
THLRKENKHI ITSVNITTQH YLNIEAENSV LKAQVGELSH RLQSLDEILT FSNASNGVFG  120
AGDSSSFTEP YDSLLNPLNL QYLNQPIMAA AADMFQR
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the DNA G-box motif 5'-CACGTG-3' of MAN7 promoter. Involved in the positive regulation of seed germination through MAN7 gene activation. MAN7 is required for both, loosening of the micropylar endosperm, and rupture of the seed coat in germinating seeds. {ECO:0000269|PubMed:23461773}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00239DAPTransfer from AT1G75390Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018808746.11e-113PREDICTED: bZIP transcription factor 44-like
SwissprotC0Z2L52e-53BZP44_ARATH; bZIP transcription factor 44
TrEMBLA0A2I4DNM61e-112A0A2I4DNM6_JUGRE; bZIP transcription factor 44-like
STRINGXP_008236935.15e-75(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61334147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75390.17e-46basic leucine-zipper 44
Publications ? help Back to Top
  1. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]
  2. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]