PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00032276-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 584aa    MW: 65678.5 Da    PI: 4.7558
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00032276-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM163.29.3e-51151602128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....................kvkaeekewyfFskrdkkyatg 71 
                         ppGfrFhPtdeelv +yLk+k+ g++l+l ++i+evd+yk++P++Lp                       +k+++++w+fFs+rd+ky++g
  WALNUT_00032276-RA  15 PPGFRFHPTDEELVLYYLKRKICGRRLKL-DIIAEVDVYKWDPEELPGiasvfpflwfielvccrtglsILKSGDRQWFFFSSRDRKYPNG 104
                         8****************************.99***************5589***********99999887778999*************** PP

                 NAM  72 krknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                          r+nrat++gyWkatgkd+++++ +++ vg+kktLvfy+grap+ge+tdWvmhey +
  WALNUT_00032276-RA 105 GRSNRATSHGYWKATGKDRSITC-NSRIVGVKKTLVFYRGRAPNGERTDWVMHEYIV 160
                         ***********************.999****************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-559183IPR003441NAC domain
PROSITE profilePS5100553.15714183IPR003441NAC domain
PfamPF023651.2E-2615159IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0070301Biological Processcellular response to hydrogen peroxide
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 584 aa     Download sequence    Send to blast
MMVKSKSCLE EDMWPPGFRF HPTDEELVLY YLKRKICGRR LKLDIIAEVD VYKWDPEELP  60
GIASVFPFLW FIELVCCRTG LSILKSGDRQ WFFFSSRDRK YPNGGRSNRA TSHGYWKATG  120
KDRSITCNSR IVGVKKTLVF YRGRAPNGER TDWVMHEYIV DEEELKRCQN VQEYYALYKL  180
YKKSGPGPKN GEQYGAPFKE EEWVDDECSD FNNSADRDIS VKPLNEVTSV SVVRVNGQVQ  240
STLDGFEEFM KRIADETELD QPQTNDYAHN QSQVGEEETQ STMVDPSSRE GITNEPSRVL  300
QPSGKLYDVP ASFGHRQSAT SQLQIHDTLE AISAPNRKEN EPLVIHEEDF LEIDDLLNPQ  360
PGFDNNKVFE NLQFQADGLY EFDRYHDAAM FLHDIGSINS HIVADPYINI IENNIVNQFD  420
YQLQPNLDGA GPIDNQPWTH DQGRNIHTSA ESNLGPFIPP PSGIECDPTN IPTKENENGC  480
EDGDAASPFS SALWAFVESI PTTPAAASEN ALVNRALERM SSFGRVRLNL KKTNVSVGSG  540
AETVRRRAGI SKGILLISVI GLVCAILWAL IGTNVKVLGT TISS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-4621583138Stress-induced transcription factor NAC1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00179DAPTransfer from AT1G34190Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018853679.10.0PREDICTED: NAC domain-containing protein 17-like
RefseqXP_018856192.10.0PREDICTED: NAC domain-containing protein 17-like
TrEMBLA0A2I4HBZ60.0A0A2I4HBZ6_JUGRE; NAC domain-containing protein 17-like
STRINGXP_008237396.10.0(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF61313451
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.11e-140NAC domain containing protein 17