PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00030593-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | NAC | ||||||||
Protein Properties | Length: 136aa MW: 15998 Da PI: 5.5967 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.9 | 1.7e-14 | 13 | 115 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 r + t +e+ + +Lk +++++ +vi+ev+ + +eP++Lp + wyf ++++k + n + g+Wka+g+ +++s + WALNUT_00030593-RA 13 RLDCTHKEIFSSFLKMT--RSQFPG-NVITEVNPFLWEPSNLP-------EGWYFIPSEENKDT-----N---NFGFWKAKGEACKIYS-N 84 55668889999999655..455556.78**************9.......68999888877653.....3...46**************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + +g +t+ f+ +++ g+ktdW+++eyr+ WALNUT_00030593-RA 85 SVITGWSTTFEFF-EDHTYGHKTDWMIQEYRM 115 99***********.688899**********97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 18.57 | 8 | 135 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.3E-8 | 13 | 115 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 5.23E-16 | 26 | 121 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence Send to blast |
MFPSAATALG DLRLDCTHKE IFSSFLKMTR SQFPGNVITE VNPFLWEPSN LPEGWYFIPS 60 EENKDTNNFG FWKAKGEACK IYSNSVITGW STTFEFFEDH TYGHKTDWMI QEYRMVQGKP 120 YESNKAQVFY GIHWYY |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018855400.1 | 6e-92 | PREDICTED: NAC domain-containing protein 79-like | ||||
TrEMBL | A0A2I4HGV8 | 1e-90 | A0A2I4HGV8_JUGRE; NAC domain-containing protein 79-like | ||||
STRING | POPTR_0014s04080.1 | 7e-35 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10588 | 22 | 35 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62380.1 | 3e-09 | NAC-domain protein 101 |