PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00026011-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 269aa    MW: 30746 Da    PI: 6.1716
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00026011-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM140.69.5e-4441401128
                 NAM   1 lppGfrFhPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk....kvkaeekewyfFskrdkkyatgkrknratksgyW 83 
                         lppGfrF Pt+eelv++yL++k+egk+      +++vi+ vdiy+++PwdLp+     ++++ ++w+fF++r++++a+g r++r t++gyW
  WALNUT_00026011-RA   4 LPPGFRFYPTEEELVSFYLHNKLEGKRedlnRVMDRVIPVVDIYESNPWDLPQysgvLCYGDPEQWFFFVPRQESEARGGRPRRLTTTGYW 94 
                         79*************************6664334457***************656664455778*************************** PP

                 NAM  84 katgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         katg+ + v+s+ +++ +g k+t+vfy+grap g+kt+W m+ey++
  WALNUT_00026011-RA  95 KATGSPNYVYSSnTSRIIGEKRTMVFYNGRAPYGKKTEWKMNEYKI 140
                         **********9866778***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.22E-483169IPR003441NAC domain
PROSITE profilePS5100550.7264169IPR003441NAC domain
PfamPF023654.7E-235140IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 269 aa     Download sequence    Send to blast
MDDLPPGFRF YPTEEELVSF YLHNKLEGKR EDLNRVMDRV IPVVDIYESN PWDLPQYSGV  60
LCYGDPEQWF FFVPRQESEA RGGRPRRLTT TGYWKATGSP NYVYSSNTSR IIGEKRTMVF  120
YNGRAPYGKK TEWKMNEYKI SEGDASSSSS TTAIPSLQQE FSLCRVYQKS KCLRAFDRRP  180
SGVVIGERPA TAQQGYHHQG LNYRPITERI RSSPESSSSG DHGGHDPSSL QPAGQSHDDH  240
ENMGMAVDIN DTNYLLDSEQ LNWFQGMEK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-32317014169Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018818766.10.0PREDICTED: NAC domain-containing protein 90-like
TrEMBLA0A2I4EH880.0A0A2I4EH88_JUGRE; NAC domain-containing protein 90-like
STRINGEMJ043791e-109(Prunus persica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF87134123
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.12e-66NAC domain containing protein 90