PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00025567-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

EIL

Protein Properties

Length: 363aa MW: 41270.9 Da PI: 4.2559

Description

EIL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00025567-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	EIN3	26.8	8.5e-09	113	174	302	353
X...........XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXXXXXXXXXX CS EIN3 302 a...........gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifadknsisqne 353 + ++++krk ++++ ++ ++++ +tc+ sq+++++++l+f d+n++++++ WALNUT_00025567-RA 113 GdpqikgeiveiDSDFTQKRKLLSDQPHTMIDQKI-YTCEYSQCPYNNYRLGFLDMNARNNHQ 174 055555555555899****99999999988875.***********************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 363 aa Download sequence Send to blast
MGIFEDMGFF GDLEFLPAPP GEGDAVPERE PEVAVEDYSD DEMDVDELER RMWRDRMLLR 60 RLKEQNKGKE VADNEKQRVD DELNVDVDCK PCDVNLFNIG AAGPRDRLVM PPGDPQIKGE 120 IVEIDSDFTQ KRKLLSDQPH TMIDQKIYTC EYSQCPYNNY RLGFLDMNAR NNHQLNCPYR 180 GNFSPMFGTS NSQINKDKPT VFPLPFGQPR PAALPANQAN QTPFSVSGLG LPEDGQKMIS 240 DLMSFYDTNL QRDKSMNPGN LNATEDHNQQ QKFQPQMNNN CYSQGVIMGG NMSDETNMTM 300 HHAVFPTTGI QFDQYKPFDS AFDDIPPDNI NIADFRLSSP VNLASADYTW DSMPKQDISS 360 WYL

Sequence ? help Back to Top

Protein Sequence Length: 363 aa Download sequence Send to blast

MGIFEDMGFF GDLEFLPAPP GEGDAVPERE PEVAVEDYSD DEMDVDELER RMWRDRMLLR  60
RLKEQNKGKE VADNEKQRVD DELNVDVDCK PCDVNLFNIG AAGPRDRLVM PPGDPQIKGE  120
IVEIDSDFTQ KRKLLSDQPH TMIDQKIYTC EYSQCPYNNY RLGFLDMNAR NNHQLNCPYR  180
GNFSPMFGTS NSQINKDKPT VFPLPFGQPR PAALPANQAN QTPFSVSGLG LPEDGQKMIS  240
DLMSFYDTNL QRDKSMNPGN LNATEDHNQQ QKFQPQMNNN CYSQGVIMGG NMSDETNMTM  300
HHAVFPTTGI QFDQYKPFDS AFDDIPPDNI NIADFRLSSP VNLASADYTW DSMPKQDISS  360
WYL

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KJ193898	2e-35	KJ193898.1 Corylus avellana microsatellite BR284 sequence.
GenBank	KJ193915	2e-35	KJ193915.1 Corylus avellana microsatellite BR343 sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018846243.1	0.0	PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
Refseq	XP_018846244.1	0.0	PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
Refseq	XP_018846245.1	0.0	PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
Refseq	XP_018846246.1	0.0	PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
TrEMBL	A0A2I4GQR4	0.0	A0A2I4GQR4_JUGRE; ETHYLENE INSENSITIVE 3-like 1 protein
STRING	VIT_13s0047g00250.t01	1e-115	(Vitis vinifera)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF14993	9	13

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20770.1	5e-23	EIL family protein