PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00024081-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | NAC | ||||||||
Protein Properties | Length: 293aa MW: 34051 Da PI: 9.2043 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 152.2 | 2.4e-47 | 22 | 148 | 3 | 128 |
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 pGfrFhPt+eel+++yLk+ v gk+l++ ++i ++iy+++PwdLp ++ +e+ewyfF++rd+k+ +g r+nr+t++g+Wkatg+d++++ WALNUT_00024081-RA 22 PGFRFHPTEEELLDFYLKNMVFGKRLRF-DIIGFLNIYHHDPWDLPGLARIGEREWYFFVPRDRKHGSGGRPNRTTENGFWKATGSDRKIV 111 9*************************99.99***************8778899*************************************9 PP NAM 94 sk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + ++ +gl+ktLvfykgrap+g+ktdWvm+eyrl WALNUT_00024081-RA 112 TIsdPKRIIGLRKTLVFYKGRAPRGNKTDWVMNEYRL 148 87666778***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.63E-57 | 19 | 166 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 54.831 | 20 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.5E-25 | 22 | 148 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 293 aa Download sequence Send to blast |
MPYLTKMTAT AMDEMTPELE LPGFRFHPTE EELLDFYLKN MVFGKRLRFD IIGFLNIYHH 60 DPWDLPGLAR IGEREWYFFV PRDRKHGSGG RPNRTTENGF WKATGSDRKI VTISDPKRII 120 GLRKTLVFYK GRAPRGNKTD WVMNEYRLPD SSPLPKDIVL CKIYRKATSL KVLEQRAAME 180 EEMKNFHASP YSSPPSSSLE TVSFLTQRED QFVPPMPVHN IVFKKEAEED TKHGRPIESR 240 GCSTSLHLPL GKDKLPELQV PKTTMDWTQD QFWTQLNSPW LQSLTPYANI LNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 2e-46 | 14 | 166 | 6 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018849198.1 | 0.0 | PREDICTED: NAC domain-containing protein 35-like | ||||
Swissprot | Q10S65 | 1e-104 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A2I4GZ82 | 0.0 | A0A2I4GZ82_JUGRE; NAC domain-containing protein 35-like | ||||
STRING | XP_008236110.1 | 1e-151 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6214 | 32 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 1e-119 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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