PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00015577-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | NAC | ||||||||
Protein Properties | Length: 113aa MW: 13114.2 Da PI: 10.7226 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 94.1 | 2.3e-29 | 14 | 91 | 51 | 128 |
NAM 51 vka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +k +e ++y F++rd+ky++g+r+nra+ +gyWkatg d++++s +g+ vg +k Lvfy g+apkg+kt+W+mhe+r+ WALNUT_00015577-RA 14 YKDyQEGQLYIFTPRDRKYRNGRRPNRAAGDGYWKATGADRKIKS-NGTIVGYRKALVFYIGKAPKGKKTNWIMHEFRV 91 333245589************************************.999****************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 32.488 | 1 | 112 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.14E-32 | 10 | 106 | IPR003441 | NAC domain |
Pfam | PF02365 | 3.2E-13 | 22 | 91 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 113 aa Download sequence Send to blast |
MKVTLEFLPL TAKYKDYQEG QLYIFTPRDR KYRNGRRPNR AAGDGYWKAT GADRKIKSNG 60 TIVGYRKALV FYIGKAPKGK KTNWIMHEFR VKDSPCSERG SNGMKVCRFS SFY |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-32 | 17 | 109 | 68 | 162 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-32 | 17 | 109 | 68 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-32 | 17 | 109 | 68 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-32 | 17 | 109 | 68 | 162 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
3swm_B | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
3swm_C | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
3swm_D | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
3swp_A | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
3swp_B | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
3swp_C | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
3swp_D | 2e-32 | 17 | 109 | 71 | 165 | NAC domain-containing protein 19 |
4dul_A | 2e-32 | 17 | 109 | 68 | 162 | NAC domain-containing protein 19 |
4dul_B | 2e-32 | 17 | 109 | 68 | 162 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor involved in abscisic acid-mediated stomatal closure (PubMed:25005917). Regulates the expression of NCED1, a gene involved in the biosynthesis of abscisic acid (ABA) (PubMed:25005917). Required for the stomatal closure induced by the bacterial pathogen Pseudomonas syringae pv tomato DC3000, but not for stomatal reopening (PubMed:25005917). {ECO:0000269|PubMed:25005917}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by abscisic acid (ABA), dehydration and wounding. {ECO:0000269|PubMed:25005917}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018831763.1 | 5e-65 | PREDICTED: NAC domain-containing protein 68-like | ||||
Swissprot | Q9SQL0 | 2e-32 | JA2_SOLLC; NAC domain-containing protein JA2 | ||||
TrEMBL | A0A2I4FJE2 | 1e-63 | A0A2I4FJE2_JUGRE; NAC domain-containing protein 68-like | ||||
STRING | XP_008227355.1 | 2e-41 | (Prunus mume) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10112 | 16 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52890.1 | 3e-33 | NAC domain containing protein 19 |
Publications ? help Back to Top | |||
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