PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | WALNUT_00010995-RA | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
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Family | EIL | ||||||||
Protein Properties | Length: 618aa MW: 70224.5 Da PI: 5.264 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 518.9 | 2.2e-158 | 48 | 425 | 1 | 353 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 +el++rmw+d+m+lkrlke++k ke ++ +k+++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+gasd+L WALNUT_00010995-RA 48 DELERRMWRDKMRLKRLKEQNKC----KEG-IDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNL 133 79*****************9996....788.9*********************************************************** PP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS EIN3 92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182 r+WWk+kv+fdrngpaai+kyqa+n+i+++++++++ ++h+l+elqDTtlgSLLsalmqhcdppqrrfplek+v+pPWWPtG+e+ww+ WALNUT_00010995-RA 134 REWWKDKVRFDRNGPAAITKYQADNAIPGKNDGCNS-IGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKAVPPPWWPTGNEDWWP 223 **********************************88.9***************************************************** PP HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX...XXXXX CS EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss...slrkq 270 +lgl+kdqg+ppykkphdlkkawkv+vLtavikh+sp+i++ir+l+rqsk+lqdkm+akes+++l+++nqee ++++++++s s+ + WALNUT_00010995-RA 224 QLGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHISPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEETLARELYPDSCpplSSGGG 314 *********************************************************************************444456666* PP XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XX CS EIN3 271 spkvtlsceqkedvegkkeskikhvqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqs 331 s ++++++ +++dveg +++ +v ++k ++ ++++++krk+ ++ + +v++k ++tc+ WALNUT_00010995-RA 315 SGSLVINDCSEYDVEGAEDEPNFDVPEQKPENlhlssmgmermrerlsvqqppypfkgesitNLDFIQKRKASSDLNVIVEQK--IYTCEF 403 ***************776666699*****999***************************************766666666665..6***** PP XXXXX.XXXXXXXXXXXXXXXX CS EIN3 332 sqfrgsetelifadknsisqne 353 q+++se++l+f+d++s+++++ WALNUT_00010995-RA 404 LQCPYSEVRLGFHDRTSRDNHQ 425 ********************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF04873 | 5.1E-129 | 48 | 295 | No hit | No description |
Gene3D | G3DSA:1.10.3180.10 | 1.5E-75 | 168 | 305 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
SuperFamily | SSF116768 | 1.29E-61 | 174 | 298 | IPR023278 | Ethylene insensitive 3-like protein, DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0001666 | Biological Process | response to hypoxia | ||||
GO:0009873 | Biological Process | ethylene-activated signaling pathway | ||||
GO:0042742 | Biological Process | defense response to bacterium | ||||
GO:0071281 | Biological Process | cellular response to iron ion | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 618 aa Download sequence Send to blast |
MMMFEDMGLC SDMDFIFAPV GGGEAAALPP EPEAMMDDDY TDEEVDVDEL ERRMWRDKMR 60 LKRLKEQNKC KEGIDMAKQR QSQEQARRKK MSRAQDGILK YMLKMMEVCK AQGFVYGIIP 120 EKGKPVTGAS DNLREWWKDK VRFDRNGPAA ITKYQADNAI PGKNDGCNSI GPTPHTLQEL 180 QDTTLGSLLS ALMQHCDPPQ RRFPLEKAVP PPWWPTGNED WWPQLGLPKD QGPPPYKKPH 240 DLKKAWKVGV LTAVIKHISP DIAKIRKLVR QSKCLQDKMT AKESATWLAI INQEETLARE 300 LYPDSCPPLS SGGGSGSLVI NDCSEYDVEG AEDEPNFDVP EQKPENLHLS SMGMERMRER 360 LSVQQPPYPF KGESITNLDF IQKRKASSDL NVIVEQKIYT CEFLQCPYSE VRLGFHDRTS 420 RDNHQLTCPY RSPSEFGGSN IHVNEVKPII FPQSFVQPKP APPSVNSTQP SFELSGLGVP 480 EDGQKMISEL MSIYDTNIQG NRNLISSNKA VIENQNLHQL KNQPQQDIYF HGEGVVMEGK 540 FFEESNTHSC HQMFTHEESQ FDRFKVPNSP FETNHGNNNL QMMFGSPFDL ASFDYKEDLQ 600 GVALDTLPKQ PDISIWYQ |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
4zds_A | 7e-85 | 173 | 305 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
4zds_B | 7e-85 | 173 | 305 | 2 | 134 | Protein ETHYLENE INSENSITIVE 3 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor acting as a positive regulator in the ethylene response pathway. Is required for ethylene responsiveness in adult plant tissues. Binds a primary ethylene response element present in the ETHYLENE-RESPONSE-FACTOR1 promoter with consequence to activate the transcription of this gene. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00367 | DAP | Transfer from AT3G20770 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_018858626.1 | 0.0 | PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein | ||||
Swissprot | O24606 | 0.0 | EIN3_ARATH; Protein ETHYLENE INSENSITIVE 3 | ||||
TrEMBL | A0A2I4HR43 | 0.0 | A0A2I4HR43_JUGRE; ETHYLENE INSENSITIVE 3-like 1 protein | ||||
STRING | evm.model.supercontig_103.60 | 0.0 | (Carica papaya) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF322 | 34 | 200 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20770.1 | 0.0 | EIL family protein |