PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00010159-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family WRKY
Protein Properties Length: 266aa    MW: 29756.7 Da    PI: 8.2854
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00010159-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY919.6e-2997157159
                         ---SS-EEEEEEE--TT-SS-EEEEEE-ST..T---EEEEEE-SSSTTEEEEEEES--SS- CS
                WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa..gCpvkkkversaedpkvveitYegeHnhe 59 
                         ++Dgy+WrKYGqK+ k+++ pr+Y+rC++a  gCpvkkkv+r+ ed+++++ tY geHnh+
  WALNUT_00010159-RA  97 VKDGYQWRKYGQKVTKDNPSPRAYFRCSMApaGCPVKKKVQRCVEDKSFLVATYDGEHNHD 157
                         58***************************999****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.3E-2990158IPR003657WRKY domain
SuperFamilySSF1182901.31E-2592158IPR003657WRKY domain
PROSITE profilePS5081127.11892159IPR003657WRKY domain
SMARTSM007746.2E-3197158IPR003657WRKY domain
PfamPF031069.5E-2498157IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MNNMEAHTSC NEKVKTLRAD LESLRKENET LRFKLEVMNR KCNILQAHLQ ETKAQQLGMI  60
DLTASRSNSE ITSCKRSVRI IEQQVPTPTK TSQILVVKDG YQWRKYGQKV TKDNPSPRAY  120
FRCSMAPAGC PVKKKVQRCV EDKSFLVATY DGEHNHDVNS HVPALIRDSL SSSDDEVVLP  180
KGSVANIIYP EPYPLENHSF RPSIALDLSL SGPNDKSPRN DVVENKLHNN NCNDIEEYVA  240
SLTKDPSFTA ALAAAVARSM PHLHAA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-19911581176Probable WRKY transcription factor 4
2ayd_A2e-19961581373WRKY transcription factor 1
2lex_A2e-19911581176Probable WRKY transcription factor 4
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018833672.10.0PREDICTED: WRKY transcription factor WRKY76-like
TrEMBLA0A2I4FPW20.0A0A2I4FPW2_JUGRE; WRKY transcription factor WRKY76-like
STRINGEOY293455e-75(Theobroma cacao)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73983044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.13e-37WRKY DNA-binding protein 18