PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00007917-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

Nin-like

Protein Properties

Length: 309aa MW: 35886.4 Da PI: 4.7325

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00007917-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	82.9	3.1e-26	144	191	5	52
RWP-RK 5 isledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +s +++s+yF++pi++AAkeL+v+lT+LK++CR++GI+RWPhRk+ sl WALNUT_00007917-RA 144 LSRKTISQYFYMPITQAAKELNVGLTLLKKRCRELGIRRWPHRKLMSL 191 7899*****************************************997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51519	18.087	125	211	IPR003035	RWP-RK domain
Pfam	PF02042	8.3E-22	144	191	IPR003035	RWP-RK domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0051302	Biological Process	regulation of cell division

Sequence ? help Back to Top
Protein Sequence Length: 309 aa Download sequence Send to blast
MGSQTLNGLW PKHEIGYRDD DPYLFPSQMA SLDLSWYSPM DWQYELPIQE SFMDAIPLME 60 SYPTENLFAS LDLEPAISVM QDDVFCCYGS WHGVCNETGP KLDPENQANL LLRNNDKKGN 120 NGPREDQGKM KRYREERSSS SRLLSRKTIS QYFYMPITQA AKELNVGLTL LKKRCRELGI 180 RRWPHRKLMS LQTLINNVQV LGKEEGEESE AKLREAIEIL EREKKLLEEI PDMQLENNTK 240 RLRQACFKAN YKKRKLGGMM MDSQSSSSSS NRGSADGYNM ANYERRNEEE EEEEEEVDEI 300 SLFLADFFP

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018837718.1	0.0	PREDICTED: protein RKD1-like
TrEMBL	A0A2I4G1E2	0.0	A0A2I4G1E2_JUGRE; protein RKD1-like
STRING	EOY21863	7e-93	(Theobroma cacao)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF6184	30	52

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G18790.1	1e-43	RWP-RK domain-containing protein