PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

WALNUT_00006304-RA

Organism

Juglans regia

Taxonomic ID

51240

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans

Family

bZIP

Protein Properties

Length: 150aa MW: 16963.6 Da PI: 10.5093

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
WALNUT_00006304-RA	genome	JHU	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.6	4.8e-07	24	60	5	41
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41 k+ +r+q+NRe+A+rsR + ++++e L ++ + L e WALNUT_00006304-RA 24 KKRKRMQSNRESAKRSRMKQQKKMEDLVDEKARLLRE 60 899************************9887777655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.4E-6	20	84	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.646	22	60	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	8.9E-5	22	60	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.5E-4	22	87	No hit	No description
SuperFamily	SSF57959	1.27E-5	24	70	No hit	No description
CDD	cd14702	3.38E-12	25	69	No hit	No description
PROSITE pattern	PS00036	0	27	42	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 150 aa Download sequence Send to blast
MPSTQSASSG FEADAITYGL MDEKKRKRMQ SNRESAKRSR MKQQKKMEDL VDEKARLLRE 60 LKKNSARYSG RERGWYSLES ENNLLIAEKM CLAKRLDNLN SLIVNLGLVK NNTPKSPELI 120 MLNPSLLPQC SLSRPLPEGF GLNSVSGRGF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018821766.1	1e-105	PREDICTED: basic leucine zipper 1-like
TrEMBL	A0A2I4EQT9	1e-104	A0A2I4EQT9_JUGRE; basic leucine zipper 1-like

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF15536	8	12

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	8e-19	basic leucine-zipper 44