PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00005261-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family NAC
Protein Properties Length: 342aa    MW: 38972.2 Da    PI: 7.9914
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00005261-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1531.4e-47421752128
                 NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkd 89 
                          pGfrFhPtdeelv +yL++kve k ++l + ik++diy+++PwdLpk   ++++++ke+yfF++r +ky+++ r+nr+t+sg+Wkatg d
  WALNUT_00005261-RA  42 LPGFRFHPTDEELVGFYLRRKVEMKLINL-DLIKQIDIYNHDPWDLPKvgsCANGDQKEIYFFCRRGRKYKNSIRPNRVTRSGFWKATGID 131
                         69**************************9.99***************55666667888********************************* PP

                 NAM  90 kevlsk....kgelvglkktLvfykgrapk.gektdWvmheyrl 128
                         k+++s+     +e +glkk+Lv+y+gra k g+ktdW+mhe+rl
  WALNUT_00005261-RA 132 KPIYSHvegsAQECIGLKKSLVYYRGRAGKgGTKTDWMMHEFRL 175
                         *****988766667************9876268*********98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-4840204IPR003441NAC domain
PROSITE profilePS5100550.52841205IPR003441NAC domain
PfamPF023654.7E-2543175IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MVLLLVQKEE IVVRWNMEME AQKNMSIAEH LLVDGKNDGG FLPGFRFHPT DEELVGFYLR  60
RKVEMKLINL DLIKQIDIYN HDPWDLPKVG SCANGDQKEI YFFCRRGRKY KNSIRPNRVT  120
RSGFWKATGI DKPIYSHVEG SAQECIGLKK SLVYYRGRAG KGGTKTDWMM HEFRLAASQS  180
TNLINNPKNS TQEAEVWTLC RILKRDVSNK KYASEWQKNN SKRNLAGYSS SITCSSDQSN  240
NITDEYNSTF GALAAEIGNE GRPMISSSSI TDHPMDEKNN MLLARQRILT GQVPYNMASS  300
CLSDANPNDE DRHEISCKEG NWDELMSVVE FAINPSLLYC LK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A9e-414321119171NO APICAL MERISTEM PROTEIN
1ut4_B9e-414321119171NO APICAL MERISTEM PROTEIN
1ut7_A9e-414321119171NO APICAL MERISTEM PROTEIN
1ut7_B9e-414321119171NO APICAL MERISTEM PROTEIN
3swm_A9e-414321122174NAC domain-containing protein 19
3swm_B9e-414321122174NAC domain-containing protein 19
3swm_C9e-414321122174NAC domain-containing protein 19
3swm_D9e-414321122174NAC domain-containing protein 19
3swp_A9e-414321122174NAC domain-containing protein 19
3swp_B9e-414321122174NAC domain-containing protein 19
3swp_C9e-414321122174NAC domain-containing protein 19
3swp_D9e-414321122174NAC domain-containing protein 19
4dul_A9e-414321119171NAC domain-containing protein 19
4dul_B9e-414321119171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018838923.10.0PREDICTED: putative NAC domain-containing protein 94
TrEMBLA0A2I4G4T80.0A0A2I4G4T8_JUGRE; putative NAC domain-containing protein 94
STRINGXP_008225724.11e-102(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF101334112
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-77NAC domain containing protein 42