PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID WALNUT_00004731-RA
Organism
Juglans regia
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fagales; Juglandaceae; Juglans
Family bZIP
Protein Properties Length: 475aa    MW: 52675 Da    PI: 4.65
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
WALNUT_00004731-RAgenomeJHUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.39.3e-15303357357
                         XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                         +lkr rr+ +NRe+ArrsR+RK+++++eLe  v++  +eN +L k+l   ++++ 
  WALNUT_00004731-RA 303 DLKRVRRMVSNRESARRSRRRKQEQLQELELQVEQVRGENVSLCKQLTDANQQYN 357
                         69******************************************88887777765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-11297356No hitNo description
SMARTSM003382.0E-14301365IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.013303357IPR004827Basic-leucine zipper domain
PfamPF001706.1E-12304356IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-11305356No hitNo description
PROSITE patternPS000360308323IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 475 aa     Download sequence    Send to blast
MAMATSRDSW SILWSEPTSH DSDASRQRQL LIAPLLTGFR FCKWEAHEFY TNILILVRCD  60
PIISIRPLSP VVEPFQLVEL GLSLCSGTPS QIASIFNSGD MKRSASELAL EEFIRRTING  120
PELIDTGTRD NDDKYQINGE FQSHERDRTG FADEVDGYLT DVLSGDLANY ALKSRDIISL  180
FSGCGGLTET LLGSPLLTFK KSSISATMDS QSSICGMIEE TCIYISILQD ILEFNESPFC  240
LFFFLILERF GNLSVSSPMS ANKPEGRDTQ ERRGTSGSSH EQSDDEDVEL EAGPCEQSTD  300
PTDLKRVRRM VSNRESARRS RRRKQEQLQE LELQVEQVRG ENVSLCKQLT DANQQYNVAD  360
TNNRVLKSDV EALRAKVKLA EDMVARGSLN CSLYQLLQSH LGTPQPLNTY NLRRVPNVSP  420
TITVHGNDAS FAGMTVSGQN SAIVQGDTNA NNSNNIKTGI LSSNAVITED ANVLF
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317324RRSRRRKQ
2319324SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018845422.10.0PREDICTED: basic leucine zipper 25
TrEMBLA0A2I4GNE00.0A0A2I4GNE0_JUGRE; basic leucine zipper 25
STRINGXP_008219985.11e-100(Prunus mume)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41953458
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24800.15e-53basic leucine zipper 9