PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S15085.10
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family WRKY
Protein Properties Length: 229aa    MW: 25603.1 Da    PI: 8.8281
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S15085.10genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY33.58.7e-11131152223
                    --SS-EEEEEEE--TT-SS-EE CS
           WRKY   2 dDgynWrKYGqKevkgsefprs 23 
                    +D ++WrKYGqK++kgs++pr+
  Jcr4S15085.10 131 SDMWAWRKYGQKPIKGSPYPRQ 152
                    79*******************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.3E-10116153IPR003657WRKY domain
SuperFamilySSF1182907.72E-8124152IPR003657WRKY domain
PROSITE profilePS5081113.356125151IPR003657WRKY domain
SMARTSM007741.3E-4130178IPR003657WRKY domain
PfamPF031061.1E-6132158IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MGEFTLTEDW DLQAVVRGRS TNDDLWSFLE IFESKSDLAG HEEICKPFLR QQARSAQSNP  60
TINTSSSDSM SIISNCEMKE PDQKLQKQQA FSGSASPVIA TDATMAAKLK RSRKNQQKRV  120
VKHVTEDGLS SDMWAWRKYG QKPIKGSPYP RQALQPAQKA SSRVRSPMVD IVRFEELITT  180
FPLTDHPLVL NRCGICLRCA GLATYTPPWG LSVLAEVCPT TGQRNEGRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC4852971e-149KC485297.1 Jatropha curcas WRKY transcription factor 45 (WRKY45) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012087205.14e-93probable WRKY transcription factor 27 isoform X1
TrEMBLA0A140H8L61e-48A0A140H8L6_MANES; WRKY transcription factor 12
STRINGcassava4.1_020980m2e-49(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF62173150
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.15e-18WRKY DNA-binding protein 27