PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S05163.20
Common NameJCGZ_18752
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family NAC
Protein Properties Length: 339aa    MW: 38709.5 Da    PI: 5.064
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S05163.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM35.92.2e-112672148
            NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
                   lp+G+rF P+d+el+++yL +k+++++++  + i+ v+ yk  P+ L 
  Jcr4S05163.20 26 LPVGYRFVPRDDELITHYLMNKIANNPMPR-NRIRVVNFYKQSPQLLT 72
                   799*************************99.77************996 PP
2NAM27.39.9e-097410596127
            NAM  96 kgelvglkktLvfykgrapkgektdWvmheyr 127
                    k++  g++k+L +y+g++ +g++tdW mhey 
  Jcr4S05163.20  74 KENPSGVRKSLDYYEGKQGSGKRTDWKMHEYV 105
                    56778**************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.3391137IPR003441NAC domain
SuperFamilySSF1019412.09E-2622136IPR003441NAC domain
PfamPF023658.0E-1127105IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MEENNNQKTN ESVFDLDDYD TFFNSLPVGY RFVPRDDELI THYLMNKIAN NPMPRNRIRV  60
VNFYKQSPQL LTDKENPSGV RKSLDYYEGK QGSGKRTDWK MHEYVIIHGK HSPAISNQKE  120
KDHMQLDEWV LCKLYNNKAD SKKNEINEEE ETSNSNATVP IASASNPELA NDSMIIKQSM  180
CYPQQDLSVS PRFPPSYPSS AIPPLPSALD YSRSDYGHHT SYPYSLLLPQ PPALNYSCSD  240
YGDHTSCPHS PLAPFPPVLD YSGNDYLNGY GISFQSHEPQ PCNDYLNGYG ISFQSHEPHP  300
NYHNDFYESY SLHMANGDQP GSSNPNPNMH FVKEEYNDP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC7753370.0KC775337.1 Jatropha curcas NAC transcription factor 059 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020537887.10.0NAC transcription factor 32
TrEMBLR4NHS00.0R4NHS0_JATCU; NAC transcription factor 059
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-17NAC-like, activated by AP3/PI
Publications ? help Back to Top
  1. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  2. Wu Z, et al.
    Genome-Wide Analysis of the NAC Gene Family in Physic Nut (Jatropha curcas L.).
    PLoS ONE, 2015. 10(6): p. e0131890
    [PMID:26125188]