PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S04307.60
Common NameJCGZ_09831, LOC105635733
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family bZIP
Protein Properties Length: 278aa    MW: 31171.3 Da    PI: 5.1736
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S04307.60genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.32.4e-11201246550
                    CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                    kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++ 
  Jcr4S04307.60 201 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 246
                    8999*********************************999987765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-13197261IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.703199251IPR004827Basic-leucine zipper domain
PfamPF001706.2E-10201245IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.14E-12201255No hitNo description
Gene3DG3DSA:1.20.5.1708.1E-14201252No hitNo description
CDDcd147032.47E-24202252No hitNo description
PROSITE patternPS000360204219IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MAQLPPKIPT MTPNWLPFPH QPISNDNFFT NTAIAATATA TAVVENYQSK RFDEFLDFTS  60
SRRGVHRRSI SDSITFLETS SATQSAEECN NSGNNNNNSS NAFISGNLGF DKLDDDEQLM  120
SMFFDDMSLS LPPSTSNPST PSDQNSNNDE KTMAASDQRQ QQQLQSHQQQ EQQKAKNEPG  180
EEESSICNQE TTQQPTIIDP KRVKRILANR QSAQRSRVRK LQYISELERS VTTLQTEVSA  240
LSPRVAFLDH QRLILNVDNS ALKQRIAALA QDKIFKDG
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012074209.10.0basic leucine zipper 61
SwissprotQ9M2K41e-72BZP61_ARATH; Basic leucine zipper 61
TrEMBLA0A067KJ830.0A0A067KJ83_JATCU; Uncharacterized protein
STRINGcassava4.1_011494m1e-109(Manihot esculenta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20113488
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-65bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Zhang L, et al.
    Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress.
    PLoS ONE, 2014. 9(5): p. e97878
    [PMID:24837971]
  3. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  4. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]