PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S03146.60

Common Name

JCGZ_21497, LOC105649603

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

VOZ

Protein Properties

Length: 438aa MW: 48594.8 Da PI: 5.8175

Description

VOZ family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S03146.60	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	VOZ	435.3	8.3e-134	202	419	1	217
VOZ 1 pppsaflgpkcalwdctrpaqg.sewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwnaael 95 ppp+aflgpkcalwdc+rpaqg +w+qdycssfh +lalneg+pg+ pvlrp+gi+lkdgllfaalsak+qgk+vgipecegaatakspwna+el Jcr4S03146.60 202 PPPAAFLGPKCALWDCPRPAQGgLDWCQDYCSSFHHALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQGKDVGIPECEGAATAKSPWNAPEL 297 89****************9648******************************************************************** PP VOZ 96 fdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrlelklvd 191 fdls+legetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvm+efgglkrsyymdpqp+++fewhlyeyei+++da+alyrlelk vd Jcr4S03146.60 298 FDLSVLEGETIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNNFEWHLYEYEISKCDACALYRLELKAVD 393 ******************************************************************************************** PP VOZ 192 ekksakgkvskdsladlqkklgrlta 217 +kk akgk+ ++s+adlqk++grl+a Jcr4S03146.60 394 GKKGAKGKIINESVADLQKQMGRLSA 419 **********************97 PP

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009408	Biological Process	response to heat
GO:0009414	Biological Process	response to water deprivation
GO:0009631	Biological Process	cold acclimation
GO:0009816	Biological Process	defense response to bacterium, incompatible interaction
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0048578	Biological Process	positive regulation of long-day photoperiodism, flowering
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 438 aa Download sequence Send to blast
MGKGSKINCK SVSHKLFKDK AKNRVDDLQG MFIDLQFARK ESRSIDVAVL EEQVHQMLRE 60 WKAELNEPSP ATSLQQGGSL GSFSSDICRL LQLCEEEDDA TSALAAPKPE PNDQSLQVGD 120 SVIFHEVQQE HNFSFVDQCK DSPSGAHSMA LNNLEGAAQL DYHQYDLSQN FESNFYAGFH 180 STDLCGEDAI PNVSSYIPSI CPPPAAFLGP KCALWDCPRP AQGGLDWCQD YCSSFHHALA 240 LNEGPPGMGP VLRPGGIGLK DGLLFAALSA KAQGKDVGIP ECEGAATAKS PWNAPELFDL 300 SVLEGETIRE WLFFDKPRRA FESGNRKQRS LPDYSGRGWH ESRKQVMNEF GGLKRSYYMD 360 PQPLNNFEWH LYEYEISKCD ACALYRLELK AVDGKKGAKG KIINESVADL QKQMGRLSAV 420 VFLLNNKRFV KGRTKSEC

Sequence ? help Back to Top

Protein Sequence Length: 438 aa Download sequence Send to blast

MGKGSKINCK SVSHKLFKDK AKNRVDDLQG MFIDLQFARK ESRSIDVAVL EEQVHQMLRE  60
WKAELNEPSP ATSLQQGGSL GSFSSDICRL LQLCEEEDDA TSALAAPKPE PNDQSLQVGD  120
SVIFHEVQQE HNFSFVDQCK DSPSGAHSMA LNNLEGAAQL DYHQYDLSQN FESNFYAGFH  180
STDLCGEDAI PNVSSYIPSI CPPPAAFLGP KCALWDCPRP AQGGLDWCQD YCSSFHHALA  240
LNEGPPGMGP VLRPGGIGLK DGLLFAALSA KAQGKDVGIP ECEGAATAKS PWNAPELFDL  300
SVLEGETIRE WLFFDKPRRA FESGNRKQRS LPDYSGRGWH ESRKQVMNEF GGLKRSYYMD  360
PQPLNNFEWH LYEYEISKCD ACALYRLELK AVDGKKGAKG KIINESVADL QKQMGRLSAV  420
VFLLNNKRFV KGRTKSEC

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269\|PubMed:15295067, ECO:0000269\|PubMed:22904146}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By far-red light. {ECO:0000269\|PubMed:22904146}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012091690.1	0.0	transcription factor VOZ1 isoform X2
Swissprot	Q9SGQ0	0.0	VOZ1_ARATH; Transcription factor VOZ1
TrEMBL	A0A067JB41	0.0	A0A067JB41_JATCU; Uncharacterized protein
STRING	cassava4.1_006671m	0.0	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1498	34	94

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28520.2	0.0	vascular plant one zinc finger protein

Link Out ? help Back to Top
Entrez Gene	105649603

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Zhang L, et al. Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress. PLoS ONE, 2014. 9(5): p. e97878 [PMID:24837971] Yasui Y,Kohchi T VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis. Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5 [PMID:25351333] Kumar S,Choudhary P,Gupta M,Nath U VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition. Plant Physiol., 2018. 176(4): p. 2917-2930 [PMID:29507119] Song C,Lee J,Kim T,Hong JC,Lim CO VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis. Planta, 2018. 247(6): p. 1439-1448 [PMID:29536220]