PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Jcr4S01698.20
Organism
Jatropha curcas
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
Family NAC
Protein Properties Length: 368aa    MW: 41836.7 Da    PI: 4.3262
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Jcr4S01698.20genomeKazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.91.2e-2011511128
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknra............t 78 
                    + pGfrF+Ptdeel  +yL kk++gk + ++e+ ++++++y   ePw+  k      +++ k++yfF++ +kk++++k+k+              t
  Jcr4S01698.20   1 MLPGFRFDPTDEELAGHYLYKKLTGKLFAAAEMiVSDCQLYGReEPWEVWKrfggDERTDVKDLYFFTELKKKASQKKNKQTLitdcsrvdrsvgT 96 
                    579************************888787689999997659****862333223355588*****999988765444436788888888999 PP

            NAM  79 ksgyWkat..gkdkevlsk.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +g W+    gk  ev+++     + +   +kk + +   ++++++++ W++ ey+l
  Jcr4S01698.20  97 GEGNWHREdsGKIFEVTARadfdcRIKIEATKKRFKYK--NRNSSHHCGWILFEYSL 151
                    9*****76114555555556666555558999999997..4445579********97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100523.1071166IPR003441NAC domain
SuperFamilySSF1019411.09E-162165IPR003441NAC domain
PfamPF023659.9E-163151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MLPGFRFDPT DEELAGHYLY KKLTGKLFAA AEMIVSDCQL YGREEPWEVW KRFGGDERTD  60
VKDLYFFTEL KKKASQKKNK QTLITDCSRV DRSVGTGEGN WHREDSGKIF EVTARADFDC  120
RIKIEATKKR FKYKNRNSSH HCGWILFEYS LPDLNRELVL CRLRKNGSKT GEKNKGKRKI  180
DDCEGGEVVN CEMVVTSGNK RIKANDIEAE SYYNQIRANG DDDCLVIASD FDDQMGTEFW  240
ANNQVEEQQE VTSDCSIMRG NGDYGNWVIG XDFDYPLGTE LXANNQVDEL EHVVSECNDI  300
WAPGGDECLT VGADRDEPMG TEFSVEELLD NANTFEFDQI DYGEENEDFF ADVQKFLGSD  360
SDPGSGSV
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012069059.11e-138NAC domain-containing protein 53-like, partial
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13633523
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36160.15e-10NAC domain containing protein 76