PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Jcr4S01220.30

Common Name

JCGZ_12229, LOC105639562

Organism

Jatropha curcas

Taxonomic ID

180498

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha

Family

bZIP

Protein Properties

Length: 301aa MW: 33726.4 Da PI: 6.4272

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Jcr4S01220.30	genome	Kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.4	9.7e-11	181	224	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + Jcr4S01220.30 181 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 224 8999********************************98877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.8E-14	177	241	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.622	179	231	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	3.0E-11	181	232	No hit	No description
Pfam	PF00170	2.8E-9	181	225	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.62E-11	181	235	No hit	No description
CDD	cd14703	5.58E-23	182	232	No hit	No description
PROSITE pattern	PS00036	0	184	199	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence Send to blast
MQPTAWPDFS HQKLPSTVSA IMPPSNNNAA TAAAATQNPS WVDEFLDFSS ARRGTHRRSV 60 SDSIAFLEAP LLEECRGTGG PPHHGSEHNS STDFDKFDDE QFLSMFTDDI TKAVAAPSCS 120 NPSTPSDHNS INDEKETTPS DQKLQKIRNE TDEVQSQCQT ETQTPPNATN TNSSDRIVDP 180 KRVKRILANR QSAQRSRVRK LQYISELERS VTSLQAEVSV LSPRVAFLDH QRLLLNVDNS 240 ALKQRIAALA QDKIFKDAHQ EALKREIERL RQVYHQQNLK KMETASPATD PTEKEQQLLQ 300 V

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_012079033.1	0.0	basic leucine zipper 61
Swissprot	Q9M2K4	1e-117	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A067K9X8	0.0	A0A067K9X8_JATCU; Uncharacterized protein
STRING	cassava4.1_024267m	1e-167	(Manihot esculenta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-118	bZIP family protein

Link Out ? help Back to Top
Entrez Gene	105639562

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Zhang L, et al. Global analysis of gene expression profiles in physic nut (Jatropha curcas L.) seedlings exposed to salt stress. PLoS ONE, 2014. 9(5): p. e97878 [PMID:24837971] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]