PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Jcr4S00606.50 | ||||||||
Common Name | JCGZ_18491, LOC105641550 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Jatropheae; Jatropha
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Family | SAP | ||||||||
Protein Properties | Length: 83aa MW: 8587.42 Da PI: 5.7706 | ||||||||
Description | SAP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SAP | 101.5 | 1e-31 | 1 | 79 | 1 | 79 |
SAP 1 mssssssssseseegsegge.ggdassgesegpsssrqraanevwpePflealatqvaidasrslGrlaaasalanvfqv 79 mssssss++ + ++gs ++ +g + +ge+egps++r+ra+nevwpePf+eala+qvaidasr+lGrlaaa+alanvfqv Jcr4S00606.50 1 MSSSSSSEDGN-GNGSGRHYgAGSSRAGEYEGPSRTRPRAINEVWPEPFVEALAAQVAIDASRILGRLAAAQALANVFQV 79 77777766654.4443333303344559***************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 83 aa Download sequence Send to blast |
MSSSSSSEDG NGNGSGRHYG AGSSRAGEYE GPSRTRPRAI NEVWPEPFVE ALAAQVAIDA 60 SRILGRLAAA QALANVFQVP VVS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012081526.1 | 3e-46 | transcriptional regulator STERILE APETALA | ||||
TrEMBL | A0A067K1B3 | 6e-45 | A0A067K1B3_JATCU; Uncharacterized protein | ||||
STRING | cassava4.1_024963m | 7e-25 | (Manihot esculenta) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF7687 | 31 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35770.1 | 2e-11 | SAP family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 105641550 |
Publications ? help Back to Top | |||
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